Pseudonocardia sp. EC080625-04: FRP1_18830
Help
Entry
FRP1_18830 CDS
T04054
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psee03036
]
FRP1_18830
Chromosome and associated proteins [BR:
psee03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FRP1_18830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
ALE74513
LinkDB
All DBs
Position
complement(4065379..4068987)
Genome browser
AA seq
1202 aa
AA seq
DB search
MHLKTLTMKGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDAISWVLGEQGAKALRGGK
MEDVIFAGTSGRSALGRAEVTLTIDNSDGALPIDYSEVSVTRRMFRDGAGEYEINGARAR
LLDVQELLSDSGIGREMHVIVGQGQLDGVLQSKPEDRRAYIEEAAGVLKHRKRKEKALRK
LDAMQANLTRLTDLTAELRRQLKPLGRQAEIARKAQSVQTELRDARLRLAADDLVTLQEE
ITREEADQDQARRRRAETEEQLDTARERQQELETALAADAPRLQAAQDTWYQLSALAERL
RGTVRLAEERVRHLTSSDAAERTPGRDPDETEAEADAIAEQEEELVAGVAEARRRLDEAV
TEKAERERTLAAAEREHLAAVRAIADRRAGIATLAGKADALRSGVAATAEEIERLSEALA
EASTRTEQAEAELEEAREGLGLDASDESGDALAERVEQAEAAHRAAQERVAELARAERDA
EQRRAHWRARVDALEVGLVRRDGTGALLGSGTDDAADGVLGAVAELVVVEPSARTAVAAA
LGEVAEGVAVSSVPSAAGALRALRDGDAGRAALLVGGAGAGDGPPGAVPVPDGPPPAGRW
AASLVTAPPALGAPLAALLREVVVVDDLGAAAAALDARPDLTAVTTDGDLLTAHAARGGA
GAGEGALQLQAAVDDAVTERDAVDAELESLRPTLEGARAEEEARGTDLGTARTAVADADR
RRAAAAAQLGRLEQVVSSARAEAQRLRERRDGVETRRSESLIELEAAEHQLSLAEDAPVD
DEPDTELRDEAAEKVEAVRSEEVECRLALRTAEERARAIAGKAESLRRQAHSERQARARA
EAAATERERASEIARLVVDAGGTASERIEVSLAAAAAERDEIQAARADRERAHTEAREQT
TRLTGLLEKLTDAVHRDEMVRQQTRMRLEQLTEKILADHGIGIDDLVAEYGPDVPVPPSE
ADVAEYETAKERGDQVSAPPAVPFDRATQERRLKRAEKDLSLLGKVNPLALEEFAALEER
YRFLSTQLEDLKNTRRDLLTVVREVDDKILEVFTTAYHDVAREFETVFATLFPGGDGRLV
LTDPEDMLTTGIEVEARPPGKKVKRLSLLSGGERSLTAMALLVAIFRARPSPFYVLDEIE
AALDDVNLRRLISLMEELRAASQLIVITHQKPTMEVADALYGVSMRGDGITQVISQRLRP
AS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaagacgctgacgatgaagggcttcaagtccttcgcctcggccaccaccctg
cgcctggaacccgggatcacctgcgtcgtcggcccgaacgggtccggcaagtccaacgtc
gtcgacgcgatcagctgggtgctcggcgagcagggggccaaggccctgcgcggcgggaag
atggaggacgtgatcttcgccggcacgtccggccggtcggcgctgggccgcgccgaggtc
accctcaccatcgacaactccgacggcgcgctgccgatcgactactccgaggtctcggtg
acccgccggatgttccgcgacggcgcgggcgagtacgagatcaacggggcccgggcccgg
ctgctcgacgtccaggagctgctgagcgactccggcatcggccgggagatgcacgtgatc
gtcgggcagggccagctcgacggggtgctgcagtcgaagccggaggaccggcgcgcctac
atcgaggaggcggcaggcgtcctcaagcaccgcaagcgcaaggagaaggcgctgcggaag
ctcgacgcgatgcaggccaacctgacccggctcaccgacctcaccgccgagctgcgccgc
cagctcaagccgctcgggcggcaggccgagatcgcccgcaaggcccagtcggtgcagacc
gagctgcgcgacgcgcgcctgcggctcgccgccgacgacctggtgaccctgcaggaggag
atcacccgcgaggaggccgaccaggaccaggcccgccgccgccgcgccgagaccgaggag
cagctcgacaccgcccgcgagcgccagcaggagctcgagacggccctcgccgccgacgcg
ccgcggctgcaggccgcccaggacacctggtaccagctctccgcgctggccgagcgcctg
cgcggcaccgtgcggctggccgaggagcgggtccggcacctgacgtcgtccgacgcggcc
gaacgcacccccggccgggacccggacgagaccgaggccgaggcggacgcgatcgccgag
caggaggaggagctcgtcgccggggtcgccgaggcgcgccgccggctcgacgaggccgtc
accgagaaggcggagcgcgagcggaccctcgccgcggccgagcgcgagcacctcgccgcc
gtccgggcgatcgcggaccgccgggccgggatcgcgaccctcgccggcaaggccgacgcg
ctgcgctccggtgtcgcggcgaccgcggaggagatcgagcgactgtccgaggccctcgcc
gaggcgtcgacgcggaccgagcaggccgaggccgagctggaggaggcccgcgagggcctg
ggcctcgacgcctccgacgagagcggcgacgccctcgccgagcgggtcgagcaggccgag
gccgcgcaccgcgccgcgcaggagcgggtggcggagctggcccgcgccgagcgcgacgcc
gagcagcgccgcgcgcactggcgggcccgggtggacgccctcgaggtcggactcgtccgc
cgcgacggcaccggcgcgctgctcggctccggcacggacgacgccgccgacggcgtgctc
ggcgcggtcgccgagctcgtcgtggtggagccgtcggcccggaccgcggtcgcggccgca
ctgggcgaggtcgccgagggtgtcgcggtgtcgtcggtgccgtcggcggcgggtgcgctg
cgcgccctgcgcgacggcgacgccgggcgggccgcgctgctggtcggcggcgccggggcc
ggggacggaccgcccggggcggtgccggtgcccgacggcccgccgcccgccgggcgctgg
gccgcgtcgctggtcaccgcaccccctgcactgggtgcgccgctcgccgcgctgctgcgg
gaggtcgtcgtcgtcgacgacctgggcgccgcggccgccgcgctggacgcccggcccgac
ctgaccgccgtcacgaccgacggggaccttctcaccgcgcacgccgcccgcggcggtgcc
ggggccggggagggcgcgctgcagctgcaggccgccgtcgacgacgccgtcaccgagcgg
gacgccgtcgacgccgagctggagtcgctgcggcccaccctggagggcgcccgcgccgag
gaggaggcgcgcggcaccgacctgggcaccgcccggaccgccgtcgccgacgccgaccgg
cgccgcgccgcggccgcggcccagctgggccgcctggagcaggtcgtctcctccgcccgg
gccgaggcgcagcggctgcgcgagcggcgggacggcgtcgagacccggcggtccgagtcg
ctgatcgagctggaggccgccgagcaccagctgtcgctcgccgaggacgccccggtcgac
gacgagcccgacaccgagctgcgcgacgaggccgccgagaaggtcgaggccgtccgctcc
gaggaggtcgagtgccggctggcgctgcggaccgcggaggagcgggcccgggcgatcgcc
ggcaaggccgagtcgctgcgccgccaggcccactccgagcgtcaggcccgggcccgggcg
gaggcggccgccaccgagcgggagcgggcgtcggagatcgcccggctcgtcgtcgacgcc
ggtgggacggcgtcggagcggatcgaggtctcgctcgccgccgcggccgcggagcgcgac
gagatccaggccgcccgcgccgaccgggagcgcgcccacaccgaggcccgcgagcagacc
acccggctgaccgggctgctggagaagctgaccgacgccgtccaccgcgacgagatggtg
cgccagcagacccggatgcggctcgagcagctgaccgagaagatcctcgccgaccacggc
atcggcatcgacgacctggtcgccgagtacggcccggacgtgccggtgccgccgtcggag
gccgacgtcgccgagtacgagacggcgaaggagcgcggcgaccaggtgtcggcgccgccc
gccgtgccgttcgaccgggccacccaggaacgccgcctgaagcgggccgagaaggacctc
tcgctgctcggcaaggtgaacccgctcgcgctggaggagttcgcggcgctggaggagcgc
taccggttcctctccacccagctggaggacctcaagaacacccggcgcgacctgctcacc
gtggtccgcgaggtcgacgacaagatcctcgaggtcttcacgaccgcgtaccacgacgtc
gcgcgggagttcgagaccgtgttcgcgacgctgttcccgggcggcgacgggcggctcgtc
ctcaccgaccccgaggacatgctcaccaccggcatcgaggtggaggcccgcccgccgggc
aagaaggtgaagcgattgtcgctgctgtcgggcggggagcggtcgctgaccgcgatggcc
ctgctggtggcgatcttccgggcgcggccgtcgccgttctacgtgctcgacgagatcgag
gcggccctcgacgacgtcaacctccgccggctcatctcgctgatggaggagctgcgcgcg
gccagccagctcatcgtcatcacccaccagaagccgacgatggaggtcgccgacgcgctc
tacggcgtctccatgcgcggcgacggcatcacccaggtgatctcgcaacggttgcgaccg
gcgtcgtag
DBGET
integrated database retrieval system
