Pseudonocardia sp. EC080625-04: FRP1_19015
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Entry
FRP1_19015 CDS
T04054
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRP1_19015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psee03400
]
FRP1_19015
Enzymes [BR:
psee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FRP1_19015
DNA repair and recombination proteins [BR:
psee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRP1_19015
Prokaryotic type
FRP1_19015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALE74541
LinkDB
All DBs
Position
complement(4106219..4106899)
Genome browser
AA seq
226 aa
AA seq
DB search
MAAKPLHEVVEAGWAEALAPVAETVSSMGEFLRAEIAAGRRYLPAGANVLRAFQQPFEDV
RVLIVGQDPYPTPGHAVGLSFSVAEETRPLPRSLQNIFREYTEDLGHPAPSSGDLTPWTD
QGVLLLNRCLTVAPGEPGSHRNKGWEEVTEQAIRALVARDAEPMVAILWGRDARNLVPLL
EDVPLVESAHPSPMSADRGFFGSRPFSRANDLLEEIGGDPVDWKLP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaagccgttgcacgaggtcgtcgaggcaggctgggcggaggcgctcgcgccg
gtggccgagacggtctcctcgatgggggagttcctgcgggcggagatcgccgcggggcgc
cggtacctgccggcgggggcgaacgtcctgcgggcgttccagcagcccttcgaggacgtc
cgggtactgatcgtcgggcaggacccgtacccgacgcccgggcacgccgtcggcctgtcg
ttctcggtcgccgaggagacccgcccgctaccgcgctcgctgcagaacatcttccgggag
tacacggaggatctcgggcacccggcgccgtcgtcgggtgacctgacgccgtggaccgac
cagggcgtgctgctgctcaaccggtgcctcaccgtcgctcccggcgagcccggctcgcac
cggaacaagggctgggaggaggtcaccgagcaggccatccgggcgctggtcgcccgcgac
gccgagccgatggtggcgatcctctggggccgcgacgcccgcaacctcgtcccgctgctg
gaggacgtgccgctggtcgagtcggcgcacccgtcgccgatgtcggccgaccgcgggttc
ttcgggtcccggccgttcagccgtgcgaacgacctgctggaggagatcggcggcgacccg
gtcgactggaagcttccctga
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