Pseudonocardia sp. EC080625-04: FRP1_19505
Help
Entry
FRP1_19505 CDS
T04054
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FRP1_19505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psee03019
]
FRP1_19505
03009 Ribosome biogenesis [BR:
psee03009
]
FRP1_19505
Messenger RNA biogenesis [BR:
psee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRP1_19505
Ribosome biogenesis [BR:
psee03009
]
Eukaryotic type
Pre-60S particles
RNases
FRP1_19505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALE74609
LinkDB
All DBs
Position
4223315..4223956
Genome browser
AA seq
213 aa
AA seq
DB search
MTDRLVWIDCEMTGLDLGSDALIEIAALVTDGDLNVLGEGVDVVIACDDAQLDAMPDVVR
DMHARSGLTEEVRAATVTIAEAEERVLAYIRAHVPDARTAPLAGSSIATDRGFLARDMQE
LDAYLHYRMIDVSSVKELARRWFPRVFYAKPEKGLAHRALADIQESIRELAYYRKALFVA
PPGPSTEQAQAAAAAVADVATTANPQAGGGATG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccggctggtgtggatcgactgcgagatgaccgggctcgacctcggttccgac
gcgctcatcgagatcgcggcgctggtcaccgacggggacctcaacgtcctgggcgagggc
gtggacgtcgtcatcgcctgcgacgacgcgcagctcgacgcgatgcccgacgtggtgcgt
gacatgcacgcgcgctccgggctgaccgaggaggtccgggccgcgacggtgaccatcgcc
gaggcggaggaacgggtgctcgcctacatccgcgcccacgtccccgacgcccgcaccgcg
ccgctcgccggcagctccatcgcgaccgaccgcggattcctcgcccgcgacatgcaggag
ctcgacgcctacctgcactaccggatgatcgacgtcagctcggtgaaggaactggcccgc
cgctggttcccgcgggtgttctacgcgaagccggagaaggggctggcgcaccgcgcgctg
gccgacatccaggagtcgatccgggagctcgcgtactaccggaaggcgttgttcgtggcc
ccgcccgggccgagcaccgagcaggcccaggccgccgcggccgcggtcgccgacgtggcc
acgacggcaaacccgcaggcagggggcggcgcgacggggtga
DBGET
integrated database retrieval system
