Pseudonocardia sp. EC080625-04: FRP1_21605
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Entry
FRP1_21605 CDS
T04054
Name
(GenBank) ATP-dependent DNA helicase
Organism
psee
Pseudonocardia sp. EC080625-04
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Imm75
Motif
Other DBs
NCBI-ProteinID:
ALE74882
LinkDB
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Position
complement(4678105..4681722)
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AA seq
1205 aa
AA seq
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MTRAAAEQPSPRLVRAAPPPAPDRTWSGAAARVLAHERGPLRVLGGPGTGKTSLLLDAVV
RRVRAGAPPGSLLLLVGSRRAAEELRGRLTALLTQGGDEIAGDFGVRTTRELLVRTVHSY
AFGVLRLHAARHEDPPPRLLASAEQDVVVRELLAGEIESWNGSVPGSSWPERLDPALGLP
GFAAELRELLLRAAERGLGPAELAGLGTAHGRDEWVAAARFFRTYEEVTLLRGAAGRSAP
QATAPALDSAELVAAALDALAADPGLRDQERERVRHLLVDDAQDLDPQQMELVATLAADA
ESTLLAGDPDQAVLTFRGADPQGMNAIDAPTEVLTVDHRRQPGVRAAGLRLAEKLPGAGP
ARNRPGRAAGDQRPDGARTDDRPDEQADGAPADGSRAGAGGAADGTGAGAGRPVDGDGAG
AGRPVGGGGMEARPTAEDAGDAVQVRVFGSPSAEAGWIADRLRRAHLVDGVPWSEMAVLS
RSARRTLPALRRALAAAGVPIAAPPDEVPLPRQPAVVPLLLVLRAASRPSAIDADLATSL
LTSPLGGGDPLRMRRLRRGLLRMHAAAGHDVRVVPDDDHPDPGEADPAVASSDPLLVAML
REAVGGRPDPLVMLSPAEAAPMRDVGWLLDTAARSIASGDSVEDTLWLVWRRTGLAKRWS
DASARGGPGGAAADRDLDAVLALFDAAARYTDRLPGADVGGFLEYLADQQLPGETLAPQA
PRGGAVELLSAHGSRGREWTVVAVPGVQEGLWPDLRLRGSLLGHEQLVDLVAGVAEPGSA
VSRSAPLLAEERRLFHVACTRARSALLVSAVQGEDEQPSRFLDELDPRPADATEARPVHR
PERSLVMAELVGELRRAVTAPDHGDPAQAARRRRAATQLARLAADGVPGARPDDWYGLAE
LSDHAPLRADGELVPISPSDVETIAGCPLRWVLSRHGGDESGALSAVTGSLVHALVQARA
AGADAAELESALRSAWRRLDAGAPWFGRRELSRVRDMLTAFDDWVRRSRAEGLELVAVEQ
PVQLDLEGDPPPEGPGPSGDDNPDLLAPEPADGPGGGAARSARRVRLHGRVDRLERDDQG
RPVVIDVKTGKTATSGRATAEHHQLAVYQLAASLGAFSELVGAGTGPGGGRLLFLADRKA
SGEAKEPAQSPLQPEEMGHWRDVLMTCAEDSAGAVFVARAGPDCDRCPVRTSCPAVETGR
TVVDG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgacccgagcagccgccgagcagccgtccccgcggctggtgcgcgcggccccaccgccc
gccccggaccggacgtggtcgggcgcggccgcgcgggtcctcgcgcacgagcgggggccg
ttgcgcgtgctcggcgggccgggaaccgggaagaccagcctgctgctcgacgccgtcgtc
cgccgggtgcgggccggtgccccgcccggttcgctgctgctgctcgtcggcagccggcgg
gccgcggaggagctgcgcggcaggctgacggcgctgctcacccagggcggcgacgagatc
gcgggcgacttcggcgtccgcaccacgcgcgagctgctggtccgcacggtgcactcgtac
gcgttcggggtgctgcggctgcacgcggcccggcacgaggacccgcccccgcggctgctg
gcgtccgccgagcaggacgtggtggtgcgcgagctgctcgccggtgagatcgagagctgg
aacggcagcgtgccgggatcgtcgtggccggaacggctggatccggcgctcgggctgccc
gggttcgccgcggagctgcgcgagctgctcctgcgggccgccgagcgggggctcgggccc
gcggagctcgccgggctcggcacggcccacggccgcgacgagtgggtggccgcggcgcgg
ttcttccgcacctacgaggaggtcaccctgctgcgcggggccgcgggtcgcagtgccccg
caggcgaccgctcccgcgctcgactcggcggagctggtcgcggcggcgctggacgcgctc
gccgccgatccgggcctgcgcgaccaggagcgcgagcgggtgcgccacctcctcgtcgac
gacgcgcaggatctcgacccgcagcagatggagctggtcgcgacactggcggcggacgcg
gagtccaccctcctggccggggacccggaccaggcggtgctgacgttccgtggcgcggac
ccgcagggcatgaacgcgatcgacgcacccaccgaggtgctcacggtcgaccaccgccgg
cagcccggtgtccgtgcggcgggtctgcggctcgcggagaagctgcccggcgccggcccg
gcacggaaccgccccggccgcgctgccggcgaccagcgcccggacggcgcccgcaccgac
gaccgccccgacgagcaggccgacggtgcaccggcggacgggtcccgggcaggcgccggt
ggcgcggcggacgggaccggagcaggtgccggtcggccggtggacggggatggagcaggc
gccggtcggccggtgggcgggggcggaatggaggcccgcccgacggcggaggacgccggt
gatgcggtgcaggtccgcgtgttcggctccccgtcggcggaggccgggtggatcgccgac
cggctccgccgcgcgcacctcgtcgacggcgtcccgtggtcggagatggcggtgctgtcc
cgatcggcccgccgcaccctgcccgctctgcggcgcgccctggcggcggccggcgtcccg
atcgcggcaccgccggacgaggtgccgctcccgcgccagcccgcggtggtcccgctgctg
ctggtgctgcgggcggcgtcgcgcccgtccgcgatcgacgccgacctggcgacgtcactg
ctcacctcgccgctcggcggtggtgacccgctgcggatgcgacggctgcggcgcggcctg
ctgcggatgcacgccgcagcgggacacgacgtccgcgtcgtccccgacgacgaccacccg
gatccgggggaggccgacccggcggtcgcgagcagtgatccgctgctggtcgcgatgctg
cgcgaggccgtcggggggcgtccggacccgctggtgatgctctcgcccgccgaggcggcc
ccgatgcgcgacgtggggtggctcctcgacaccgcggcgcggtcgatcgcgtccggcgac
tcggtcgaggacacgctgtggctggtgtggcggcggaccgggctggcgaagcgctggagc
gacgcgagcgcccggggcgggcccggtggcgcggccgccgaccgggacctcgacgccgtg
ctcgccctgttcgacgccgccgcccggtacaccgaccggctgccgggcgccgacgtcggc
gggttcctcgagtacctcgccgaccagcagctgcccggcgagacgctcgccccgcaggcc
ccccgcggcggcgccgtcgagctgctctccgcgcacggctcgcgcggtcgggagtggacg
gtcgtcgcggtgcccggtgtgcaggaggggctgtggccggacctgcgcctgcgggggagc
ctgctcgggcacgagcagctcgtcgatctcgtcgccggggtcgccgaacccggctcggcg
gtctcacggtcggcgccgctgctcgccgaggagcgcaggctgttccacgtcgcgtgcacg
cgcgcccggtcggcgctgctggtcagcgcggtccagggggaggacgagcagccgtcgcgc
ttcctcgacgagctcgacccccgtcccgccgacgccaccgaggcccggcctgtccaccgt
ccggaacggtccctggtcatggcggagctggtcggtgagctgcggcgggccgtcacggcc
cccgaccacggcgacccggcgcaggccgcgcgccggaggcgggcggcgacgcagctggcc
cggctcgccgccgacggggtgcccggcgcccgtcccgacgactggtacggcctcgccgag
ctctccgaccacgccccgctgcgcgccgacggcgagctggtgccgatctccccgtcggac
gtcgagaccatcgccgggtgtccgctgcgctgggtgctctcccggcacggcggcgatgag
agcggggcgctgtcggcggtgaccggatcgctggtgcacgccctggtccaggcgcgcgcc
gccggtgccgacgccgcggagctggagtcggcgctgcgctcggcctggcggcggctcgac
gcgggggccccgtggttcggccgccgggagctgtcgcgggtgcgggacatgctcaccgcg
ttcgacgactgggtgcgccgcagccgggccgaggggctggagctcgtcgccgtcgagcag
ccggtgcagctcgacctggagggcgatcccccgccggagggcccggggccgtccggcgac
gacaaccccgatctgctcgcgcccgaacccgcggacggtcccggtggtggcgccgcgcgg
tcggcccgccgggtgcggctgcacggccgggtggaccgcctcgagcgcgacgaccagggc
cgcccggtggtgatcgacgtcaagaccggcaagacggcgacgtcgggccgggcgacggcc
gagcaccaccagctggcggtctaccagctcgcggcgtcgctgggtgcgttctccgagctg
gtcggtgccggaaccggtccgggtggtggccggctgctgttcctggccgaccggaaggcg
agtggggaggccaaggaaccggcgcagtcgccgctgcagccggaggagatggggcactgg
cgcgacgtgctgatgacctgcgccgaggactcggccggtgcggtgttcgtggcgcgggcc
gggcccgactgcgaccggtgcccggtgcggacgagctgcccggccgtcgagaccgggcgg
accgtcgtggacgggtga
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