Pseudonocardia sp. EC080625-04: FRP1_23490
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Entry
FRP1_23490 CDS
T04054
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psee03400
]
FRP1_23490
Enzymes [BR:
psee01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FRP1_23490
DNA repair and recombination proteins [BR:
psee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FRP1_23490
Prokaryotic type
FRP1_23490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALE75141
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All DBs
Position
complement(5057216..5058610)
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AA seq
464 aa
AA seq
DB search
MASSTAVVWFRRDLRVADQPTFLAAADAADRALALFVLDPALLDPSGAARRNFLYGCLRE
LDSALGGRLLVVKGDPVDVVPRVATAVGADTVHVAADYGPYGRERDEQVEKALTDAGAEL
VRTGSPYAVAPGRVTKGDGDPFKVFTPFSRAWAEHGWRAPAETSASTCTWTDPSGKDGGP
RAVQVPADEPCDSALPDAGETAAAARWADFLDEGVAEYESQRDMPAKKGTSGMSPYLKYG
CVHPRTLLADLGSRRGDSVKAYRTEIAWREFYADVLYRRPDSARRNYDTGFDHLPLRTDE
AAYDDLERWKDGRTGFPIVDAGMRQLRAEAWMHNRVRMVVASFLVKDLHLPWWWGARHFM
QLLVDGDLASNQHGWQWTAGSGTDAAPYFRIFNPITQGERFDPDGDYVRRWVPELADVPG
KAVHQPWKLKDGLPDGYPERMVEHKAEREEALARYEAVKAAKRS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcactgccgtcgtgtggttccgccgcgatctccgggtcgccgaccagccg
accttcctggccgccgcggacgccgccgaccgggcactcgcgctgttcgtgctggacccg
gcgctcctcgacccgtcgggcgcggcccgccggaacttcctgtacggctgcctgcgggag
ctcgactccgcgctcggcggacggctgctggtggtgaagggcgacccggtcgacgtcgtc
ccgcgggtggcgacggccgtcggtgcggacaccgtgcacgtcgccgccgactacggcccg
tacggccgggagcgcgacgagcaggtcgagaaggccctcaccgacgccggcgccgagctc
gtccgcaccgggtccccctacgccgtcgcgccgggccgggtgaccaagggcgacggcgac
ccgttcaaggtgttcaccccgttcagccgggcctgggccgagcacggctggcgagccccc
gccgagacgtccgcgtcgacctgcacctggacggacccgtccggcaaggacggcgggcca
cgcgcggtgcaggtccccgccgacgagccctgcgactccgcgctgcccgacgcgggggag
accgcggcggcggcgcggtgggcggacttcctcgacgagggcgtcgcggagtacgagtcg
cagcgcgacatgccggcgaagaagggcacgtcggggatgtcgccgtacctcaagtacggc
tgcgtgcacccgcgcacgctgctcgccgacctcgggtcgcgccggggcgactcggtcaag
gcctaccgcaccgagatcgcctggcgggagttctacgccgacgtgctgtaccggcgtccg
gactccgcgcggcgcaactacgacaccggtttcgaccacctcccgctgcgcaccgacgag
gcggcctacgacgacctcgaacgctggaaggacgggcgcaccggcttcccgatcgtcgac
gccgggatgcgccagctccgtgccgaggcgtggatgcacaaccgggtgcggatggtcgtc
gcgtcgttcctggtcaaggacctgcacctgccgtggtggtggggcgcgcggcacttcatg
cagctcctggtcgacggcgacctcgcctccaaccagcacggctggcagtggacggccggg
tcgggcaccgacgcggcgccgtatttccggatcttcaacccgatcacccagggggagcgg
ttcgatcccgacggcgactacgtgcgccggtgggtcccggagctcgccgacgtgccgggc
aaggccgtgcaccagccctggaagctgaaggacggcctcccggacggctatcccgagcgg
atggtcgagcacaaggcggagcgcgaggaggcactggcccgctacgaagcagtgaaggcg
gcgaagcgctcgtga
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