Pseudonocardia sp. EC080625-04: FRP1_25680
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Entry
FRP1_25680 CDS
T04054
Name
(GenBank) hypothetical protein
KO
K13686
galactan 5-O-arabinofuranosyltransferase [EC:
2.4.2.46
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee00572
Arabinogalactan biosynthesis - Mycobacterium
psee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
FRP1_25680
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psee01003
]
FRP1_25680
Enzymes [BR:
psee01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.46 galactan 5-O-arabinofuranosyltransferase
FRP1_25680
Glycosyltransferases [BR:
psee01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FRP1_25680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AftA_N
AftA_C
Motif
Other DBs
NCBI-ProteinID:
ALE75436
LinkDB
All DBs
Position
5518102..5520051
Genome browser
AA seq
649 aa
AA seq
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MYDGGGPAAVDGSRPWPATVHRGPAGSGRPRSTRRPAALADLVVGPVVAVAVTVVVLAAV
DGLSIPASSNVGLALTASGGAVIALVLVLAARTARPLLAAPLTWAGLAALPSVPLALFLA
NTPHYLFGVSGDQQFRVQFLTRFADSARLADFAYADLPPYYPAAWFWVGGRAAALLGVEA
WQFHKAFSIATLAVTAVLAFALWALVTTRRRALGAAVATTLAGLATLAAYTPYSWLTGAL
VPPLAVLGLRLVRRRDGGPWVRTAVLVGLVLGVAAVTHTQILVFAGLVLTVLAVAGLVTR
TARPLPLLGTVGVVLLAALPLTLLHWLPYLVAAAGEPTYSAGQHFLAEAGSRWPVPMLEP
TALGGLCLAGTVWIVAAAGRSPVARALGATAACGYLWYLLSTLALAAGTTLLAFRIEPIM
TAALASGAVWAAADLLGLLRRWGRDASARRAGTAVVTVLAAVAVVAQVQTVPETYEWAGS
AQDYRPDGTKPDGSRNPDEPNAWLGELRGTIDGLTGRPEREVVVASANPALLTYHPYFSF
QASGAQYANPLGNYPERTDELRRWSAAAGPVELLAALDRGPARAPSVFVFSRTADGLLQL
PTTEDRFPDPSSGAPPATFGPQLFDDPAWQRRDVGPYAVLVRTATPAPR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacggcggcggcccggccgcggtggacggctcgcgaccgtggccggccaccgtg
caccgggggccggccggctccgggcgaccgcgctccacccgccgtccggcggcgctcgcg
gacctggtcgtcgggccggtggtcgcggtcgccgtgaccgtggtcgtgctcgccgcggtg
gacgggctgtcgatcccggcgtcgtcgaacgtcgggctggcgctgaccgcgtccggcggc
gcggtgatcgcgctcgtcctcgtcctggcggcccggaccgcgcgcccgctgctcgccgca
ccgctgacctgggcgggcctcgcggcgctcccgtcggtgccgctggcgctgttcctcgcg
aacaccccgcactacctgttcggggtgtccggcgaccagcagttccgggtgcagttcctg
acccggttcgccgactccgcccggctcgccgacttcgcctacgccgacctgccgccgtac
tacccggcggcgtggttctgggtgggcggccgcgccgccgcgctgctcggtgtggaggcg
tggcagttccacaaggcgttctcgatcgcgacgctggccgtgacggcggtcctggcgttc
gcgctgtgggcgctggtgacgacgcggcgccgcgcgctgggcgccgccgtcgcgacgacg
ctggccgggctcgcgacactggccgcgtacacgccgtactcgtggttgaccggtgcgctc
gtcccgccgctcgcggtcctgggcctgcggctggtgcgccgccgcgacggcgggccgtgg
gtccggacggcggtgctggtcgggctggtgctcggggtcgcggccgtcacgcacacccag
atcctggtgttcgccgggctcgtgctgaccgtgctcgcggtcgccggcctggtgacccgc
accgcgcgcccgctgccgctgctggggacggtcggcgtcgtgctcctcgcggcgctgccc
ctgacactgctgcactggctgccctacctcgtcgccgcggccggggaaccgacctacagc
gcgggtcagcacttcctcgccgaggccgggtcgcgctggccggtgccgatgctcgaaccg
accgcgctgggcgggctgtgcctggccgggacggtgtggatcgtcgccgcggccggccgc
tccccggtcgcccgcgccctcggggcgacggcggcctgcgggtacctctggtacctcctg
tcgacgctggcgctggccgcggggacgacgctcctggcgttccggatcgagccgatcatg
acggccgcgctggcgtccggggcggtgtgggcggccgccgacctcctcgggctgctccgt
cggtggggccgcgacgcgtccgcccgccgggcgggcaccgccgtggtcaccgtgctcgcg
gcggtcgccgtcgtcgcgcaggtccagaccgtcccggagacgtacgagtgggcaggctcc
gcccaggactaccggcccgacggcacgaagcccgacggctcccggaacccggacgagccg
aacgcctggctcggcgagctccgcggcacgatcgacgggctgaccgggcgtccggagcgg
gaggtcgtcgtcgcgagcgcgaaccccgcgctgctgacctaccacccgtacttctcgttc
caggcgtccggcgcccagtacgcgaacccgctggggaactacccggaacgcaccgacgag
ctccgccgctggtcggccgccgccggcccggtggagctgctggccgcgctggaccgcggc
ccggcccgcgccccgtcggtgttcgtgttctcccggaccgcggacgggctcctgcagctg
ccgacgaccgaggaccggttccccgacccgagctccggcgccccgcccgcgacgttcggc
ccgcagctgttcgacgaccccgcgtggcagcggcgggacgtcgggccgtacgcggtgctg
gtgcggaccgctacacctgcaccacggtga
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