Pseudodesulfovibrio sediminis: PSDVSF_00440
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Entry
PSDVSF_00440 CDS
T08380
Name
(GenBank) hypothetical protein
KO
K02519
translation initiation factor IF-2
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psef03012
]
PSDVSF_00440
03029 Mitochondrial biogenesis [BR:
psef03029
]
PSDVSF_00440
Translation factors [BR:
psef03012
]
Eukaryotic type
Initiation factors
MTIFs
PSDVSF_00440
Prokaryotic type
PSDVSF_00440
Mitochondrial biogenesis [BR:
psef03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
PSDVSF_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
IF2_N
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
Arf
ANT
FeoB_N
Roc
SRPRB
ATP_bind_1
Cyanate_lyase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BCS86802
LinkDB
All DBs
Position
complement(44195..47137)
Genome browser
AA seq
980 aa
AA seq
DB search
MTAKVRVEDLAAELKLSNKEIIQQLREIGVQAKSQKTVVEDEDVERLKAELKKGGAQQSE
VRRVGDSGVIIRRRRTKSKSSRKEEAAPAVEEETEETVEAAVEEKEEPSVVEEATPAEEV
VEEKPKKKPSKKKAPKKAEPQVRIIKPAVEEPPVEEPVEVKAEVVEAPVEEAVVEEAAPE
PVPEETKAASEELKEEAAPVKEKAVKAEKEAKAAPKEETPAPAAEKKAAAKDEPKKKKKK
KKEPEAPKVKIISMPTEAEVQARAAAKMQQPERRPGRPGGGRPGGPGGRPGGPGGRPGGP
GGRPGGPGGRPGGRPGGGPGMAPAPAPGIPDGRSKKKKGKKDRRVVEFATSGRKDSGSNR
FNDSLPGGRKGHKKKGRNNQQQQPVEQVQAQPMKAAKRKIKFDETIRLADMAHQMGIKAQ
DLIKALFGMGVMATINQSLDLDTATLLASEFGYEVENVSFDEQDFLIPTEADKDEDLKPR
PPVVTIMGHVDHGKTSLLDAIRLSNVTDGEAGGITQHIGAYHVQTQRGEIVFLDTPGHEA
FTTMRMRGAQVTDIVILVVAADDGVMDQTREAISHSKAAGVPIVVAVNKMDKEGANPDNV
KRELAELGLSPEDWGGDTIFAHVSAKAKTGLDELLEMVLLQAEVLELKANPDKPARGHIV
EARLDKGRGPVGTILISEGTINQGDSFVSGVHFGKVRAMFNDQGKKLKTAGPAMPVEIQG
FDGLPEAGDELFVVEEEKMARRIAQSRAMKKREKILSSKSKVTLESFLASKPNDEAQTLN
LVLKADVQGSLEAVTEALNKLSTDEIKIDVVHGGAGAITESDILLAGASEAIILGFNVRP
NLKVKEIAEQEGVEVRFYDIIYKLVQEVKDAMSGMLTPDIEEVYLGQAEVRQTFSVPKIG
VIAGCFIPDGKIKRGAMVRLLRGGVVIYTGLVSSLKREKDDAREVAKGYECGIGLEKFND
IKIGDIIEAFETKEIARTID
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaggttcgggtagaagacttggctgcagagctcaagctcagcaacaaggag
atcattcagcagcttcgcgagatcggcgttcaggctaaaagccagaaaaccgtcgtggaa
gacgaagatgtggaacgcctcaaggcggagttaaagaaaggcggagctcaacagagtgaa
gtccgtcgcgtcggcgattccggcgtaatcatcaggcgcagacgcaccaaatcaaaatct
tccagaaaagaagaagccgctcccgcagtcgaagaagagactgaggaaacggtggaagct
gctgtggaagaaaaagaagagccttccgtagtggaagaagccactcctgctgaagaagtg
gtggaagaaaagcccaaaaagaagcccagcaagaaaaaggctcccaaaaaggctgaacca
caagtcaggattatcaaacctgctgtggaggaacctcccgtggaagagcctgttgaggtg
aaagccgaggtcgtcgaggccccggtggaagaagccgtggttgaagaggccgcccccgaa
cccgtgcctgaagagaccaaagctgcttccgaagaactcaaggaagaagccgctcctgtt
aaggagaaggctgtgaaggctgaaaaagaggccaaggctgctcccaaggaagaaacccct
gcaccggctgctgaaaagaaagccgctgccaaggacgaacccaaaaagaaaaagaaaaag
aaaaaagagcctgaagctcctaaagtcaaaatcatttccatgcctaccgaggcagaggta
caggcacgtgctgcagcaaaaatgcagcagcctgaacgtcgtcccggtcgtcctggcggc
ggtcgtcccggcggtcctggcggtcgtcccggtggtcctggcggtcgtcccggcggtcct
ggtggccgtcccggaggtcctggaggccgtcctggtggtcgtcccggtggaggccctggt
atggcccctgctccggcaccaggcatacctgacggacgtagcaagaagaaaaagggcaag
aaagaccgtcgtgtcgtagaatttgccacaagcggtcgtaaagattccggtagcaatcgc
ttcaatgacagccttcctggtggccgtaaaggacacaagaagaaggggcggaacaatcag
cagcaacagccggttgaacaggtgcaagcccagccgatgaaggctgcaaagcgcaagatc
aaatttgacgaaaccattcgtctggccgacatggcccaccagatgggcatcaaggcccag
gatttgatcaaggcgttgttcggcatgggtgtcatggcgaccatcaaccagtccctggat
ctggatacggccaccctgctcgccagcgagttcggttacgaggtcgagaacgtctccttc
gacgaacaggatttcctgattcccaccgaggcagacaaagatgaagatctcaagccccgt
cctcccgtggtcaccatcatgggtcacgttgaccatggtaagacctccctgctggatgcc
atccgtctgtccaatgtgaccgatggagaagctggcggtatcacccagcatataggtgcc
taccacgtccagacacaacgcggcgagatcgtgttcctggatacccctggtcacgaagca
tttaccaccatgcgtatgcgcggtgcccaggtgacggatatcgtcatcctcgtggtcgct
gccgacgatggcgtcatggatcagacccgtgaggcaatcagccactccaaagcggctggc
gtccccatcgtggttgcagtcaacaaaatggataaagagggagccaatcccgataacgtc
aaacgcgaactggccgagttggggctctcccctgaagactggggcggcgacaccatcttc
gcgcatgtttcagccaaggcaaaaaccggccttgacgaactgctcgaaatggttctgctc
caggcagaagtactggagctcaaagccaacccggacaaacctgctcgcggtcatatcgtt
gaagcgcgtctggacaagggacgtggccccgtgggcaccatcctcatttccgaaggtacc
atcaatcagggcgacagctttgtatccggtgtccacttcggtaaagtccgcgccatgttc
aacgaccagggcaagaaactcaaaacagccggtccggccatgcccgtggaaatccagggc
tttgatggtctgcccgaagccggtgacgaactgttcgtggtggaagaagaaaagatggcc
cgccgcatcgctcaatcccgcgccatgaaaaagcgcgagaagattctgtcttccaagtcc
aaggtcaccctggagtccttcctcgcatccaagccgaacgacgaggcccagaccctgaac
ctggtcctcaaggccgatgtacagggttctctggaagcggtcaccgaagcactcaacaag
ctgtccaccgacgaaatcaaaatcgatgtcgtccacggcggtgccggtgccatcaccgag
tccgacatccttctggccggcgcatccgaagccatcattctcggcttcaacgtgcgtccg
aacctgaaggtcaaggaaatcgccgagcaggaaggtgtcgaagtccgcttctacgacatc
atctacaagctggtgcaggaagtgaaggacgccatgagcggcatgctcacaccggatatc
gaagaagtgtatctgggtcaggcagaagttcgtcagaccttctccgtacccaagatcggt
gttatcgccggttgcttcatcccggatggaaagatcaagcgtggcgcaatggttcgcctg
cttcgcggtggcgttgtcatctacacaggccttgtctcctcgctcaagcgcgagaaggac
gatgcccgtgaggttgccaagggctacgaatgcggtatcggcctcgagaaattcaacgac
atcaagatcggtgatattatcgaagcctttgaaaccaaggaaatcgcccgcaccatcgat
taa
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