KEGG   Pseudodesulfovibrio sediminis: PSDVSF_00460
Entry
PSDVSF_00460      CDS       T08380                                 
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
psef  Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:psef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psef03021]
    PSDVSF_00460 (nusA)
   03009 Ribosome biogenesis [BR:psef03009]
    PSDVSF_00460 (nusA)
Transcription machinery [BR:psef03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     PSDVSF_00460 (nusA)
Ribosome biogenesis [BR:psef03009]
 Prokaryotic type
  rRNA transcription factors
   PSDVSF_00460 (nusA)
SSDB
Motif
Pfam: NusA_N KH_5 S1 KH_2 HHH_5 KH_1 KH_NusA_C HHH_2
Other DBs
NCBI-ProteinID: BCS86804
LinkDB
Position
complement(47400..48782)
AA seq 460 aa
MSELKKAIDQISKDRGIDRDLLIDTLEEAVRSAVARKYGETMDIEVSFNEELGEIEVFEF
KIVVEDVHDPISEISLEAATAHDPNAQLDDEMGFPLKVEDLGRIAAQSAKQVIIQRMRDA
EQEIIYEEYKDRVSEIASGIIQRRDRTGWIINLGRTEALLPKDEQIPRERYKRGDRVQAY
IIDVLKESRGPQVVVSRSHPDYMIELFKREVPEVADGTVKIMGVSRDPGLRAKVAVMSRE
RDVDPVGACVGIRGSRIQNVVQELKGERIDIVVWSPDIAMYAQHALSPALISRITVDEEE
ETLEVVCPDDQLSLAIGRKGQNVKLAAKLLGWKIDIFTNSRYGELNAERKGMDQVAAVAE
ISMENFFAAGYESIDSIIQASDEELLSIKDMTESKVGDIRVAINMLAPDLFEADKDDSEE
PQEAPVDETETADEVVEETAETVEEETEESDTPADGEESK
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtcggagctgaaaaaagcaatcgaccagataagcaaagacaggggcattgaccgtgac
ctgctcattgatacccttgaagaagcagtacgatctgccgtagctcgcaaatatggcgag
accatggatatcgaagtgtccttcaacgaggaactcggcgaaatcgaagtattcgaattc
aagatcgtcgtcgaagatgtccatgaccctatcagtgaaatttccctggaagcggcaacc
gctcatgaccccaacgcccagttggatgacgagatgggcttcccgctcaaggtggaggac
ctgggacgtattgcagcgcagagcgccaagcaggtcatcatccagcgcatgcgcgatgcc
gagcaggaaatcatttacgaagaatacaaggaccgcgtgtccgaaatcgccagcggcatc
attcagcgtcgcgaccggaccggttggatcatcaacctcggccgcacggaagccctgctg
cccaaggacgaacagattcccagagaacgctacaagcgtggtgatcgcgtccaggcctat
atcatagatgtattgaaagaatcccgtggcccgcaggtcgtcgtgtccaggtcccacccg
gactacatgatcgaactgttcaagcgcgaggttcccgaggtggcagacggcaccgtcaag
atcatgggcgtatcccgcgatcccggtctgcgtgccaaagtggctgtcatgtcccgcgaa
cgcgacgtcgatcccgtgggcgcctgtgtcggtatccgcggctctcgtattcaaaacgtt
gtgcaggaactcaagggcgaacgtatcgacatcgttgtctggtccccggacatcgccatg
tacgcgcagcacgccctctcccccgcactcatctcacgcattaccgtggacgaggaagag
gagactttggaagtggtttgccccgacgatcagctcagtctggccattggccgcaagggc
cagaacgtcaaactggctgccaaacttcttggctggaagatagacatcttcaccaactct
cgttacggagaactcaacgcagagcgcaaaggcatggatcaggttgcggctgtggccgag
atctccatggagaatttctttgctgccggatacgaatccattgattccatcatccaggct
tctgatgaagaactgctctccatcaaggacatgaccgagagtaaagtcggtgatatccgt
gtggctatcaacatgctcgcccccgacctctttgaggccgacaaggacgacagtgaagag
ccgcaggaagcccctgttgatgaaaccgaaactgcagatgaagttgttgaagaaacagca
gaaactgtcgaagaagagactgaagaatccgacactcccgccgatggcgaggagtcgaaa
tag

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