Pseudodesulfovibrio sediminis: PSDVSF_01370
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Entry
PSDVSF_01370 CDS
T08380
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef03030
DNA replication
psef03430
Mismatch repair
psef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSDVSF_01370 (ssb)
03430 Mismatch repair
PSDVSF_01370 (ssb)
03440 Homologous recombination
PSDVSF_01370 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psef03032
]
PSDVSF_01370 (ssb)
03400 DNA repair and recombination proteins [BR:
psef03400
]
PSDVSF_01370 (ssb)
03029 Mitochondrial biogenesis [BR:
psef03029
]
PSDVSF_01370 (ssb)
DNA replication proteins [BR:
psef03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSDVSF_01370 (ssb)
DNA repair and recombination proteins [BR:
psef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PSDVSF_01370 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PSDVSF_01370 (ssb)
Mitochondrial biogenesis [BR:
psef03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PSDVSF_01370 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
PB4_spike
tRNA_anti-codon
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
BCS86895
LinkDB
All DBs
Position
132821..133375
Genome browser
AA seq
184 aa
AA seq
DB search
MAGSMNKVILIGRLGRDPELSYTPAGQARAKFSVATDEGYRDKQTGQKVEKTEWHNVVAW
RQTAEFCGKFLGKGRLVMVEGKLQTRKWQDQNTGQDRYMTEIVADNVQGLDRAPEGQYAG
QQQGGYQQQNNNYQQQGGYQQPQQGQGQPQQGGQPQQPQQPQQPEEDLGPAFPSEASGMD
DVPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggctggaagtatgaataaagtgattctcataggcaggctcggacgtgatcccgagttg
tcgtatacacccgccgggcaggcacgggctaagttttccgttgccacggacgagggatat
agggacaagcagacaggccagaaggtcgagaagaccgagtggcacaacgttgtcgcctgg
cgtcagacagctgagttctgcggcaagttccttggcaagggccgtctggtcatggtcgag
ggcaaattgcagacccgcaaatggcaggatcagaacaccggacaggatcggtacatgacg
gaaatcgtggccgacaatgtccagggtctggatcgtgctcctgagggccagtatgccggt
cagcagcagggtggataccagcagcagaacaataactaccagcagcagggcgggtaccaa
cagcctcagcagggacaggggcagccgcaacaaggtggacagccccagcagccccagcaa
ccccagcaaccggaagaggatctcggtccggctttcccgtccgaggccagcggcatggac
gacgtcccgttctaa
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integrated database retrieval system
