Pseudodesulfovibrio sediminis: PSDVSF_01390
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Entry
PSDVSF_01390 CDS
T08380
Name
(GenBank) Snf2 family protein
Organism
psef
Pseudodesulfovibrio sediminis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
HDA2-3
AAA_22
SWIM
Herpes_UL55
Motif
Other DBs
NCBI-ProteinID:
BCS86897
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Position
complement(134419..137628)
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AA seq
1069 aa
AA seq
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MSNGEEHIVKSILQDFIGNSVPDYILESAHEIVAANGVAKLALKKREQYWDIDGSVHGDE
FQNYTSEIGLNLSEKSINYYCNCPDSFSGVCRHVAATAVKLMKSLDTDSDETMPTPRTDW
RQTFRPFFATELEPEAGRHYIIYRIYPELGRLQVAFFRARQNKSGISQVQNEITLAQIVE
NSDWCDTSPALPGVAEQIGHYLDYWGHKVEIPAGLHSWFFRAIKGEYYLYLRESDQPVTV
ESKTMQLKLSPHLSEDGLNFEILLAREDKMPFPITDEEEIYFYGRLPLWVYYKNSFYPVQ
TGLEPKLVQAMVEQKPIVPHADVSEFLDRVWTQIPVSALYGQEDFLERVGPIFQDAEYDP
KLYLDEEGSLLVLKIQNIYTNEHGEFVMPGPNPDLQTGSYHEGGKSYLIRRAQDEEAQLF
AELQDMNFQARNNHIWFMEQEEAINFLLDYYPQLVEAYRVFGEQNLTRYKVRTTQPQVVA
EVETDEEEKWFNLELSVEYDDQRVPIDVIWEAWTKGKRYVQLKDGSYTSLPESWLNKLGH
KLKALGFDPEKAPKQHFNQFETPVLEKILEDLPQAQTDEFFVKLKEKINNFDEIKIIEQP
EALQATLRPYQAQGLSYLNFLREYGFGGILADEMGLGKTIQTLSYIQSLVDRGIEGPNLI
IVPTSVLPNWEREAQKFVPTLKLLTIYGAKREGLFQHIKDSNMVITTYALLRRDLDELLK
FEYASVILDEAQNIKNPNTITARSVRKLQAGLRVCLSGTPIENNLFELWSLFEFLMPGFL
GSQHSFQRGIVKPIKDGDEETLEYLRTRVKPFILRRTKAEVAKDLPPKIETTHYCELVDE
QRELYNALAKKLKDQVLRDVEEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNL
PSGKFDAFKDLIVDIIDGGHKVLVFSQFVKMLHVIRNWLQIREIPFAYLDGSSKDRFEQV
DRFNDSPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVENQATDRTHRIGQKRQVF
AYKMICQNTVEERILKLQEQKKDVANAIIPGQSALKSLTRDDLEMLFEI
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacggcgaagaacatatagtcaaatccattctgcaagatttcattgggaacagc
gtaccggattatattctggaaagcgcccatgaaatagttgctgccaacggtgttgccaag
ctggctctcaagaaacgagagcagtactgggacatcgacggttccgtgcatggcgatgaa
ttccagaactatacgtctgaaattggtctgaatctgtctgaaaaatccatcaactattac
tgcaattgcccggactctttctccggcgtatgccgccacgtggctgccactgcggtcaaa
ttgatgaaatcactggacacggattccgatgaaacaatgcccactccccgtacagactgg
cgccagaccttccgtccgttctttgccacggagcttgagcctgaagccggacggcattac
atcatatatcgaatttatccggaacttggtcgccttcaggtggctttcttccgcgcccgt
cagaacaagtccggcatatctcaggtgcagaacgaaatcacgcttgcccagatcgtagag
aattccgattggtgcgacacctcaccggctctgccaggcgtggctgaacagatcggccac
tatctggactattgggggcacaaagtcgaaatcccggctggcctgcactcctggttcttc
cgtgcaatcaagggagaatattacctctatctgcgtgagtccgaccagcccgtgactgtc
gagtccaaaaccatgcagctcaaactgtcaccgcatctgagcgaagacggtctgaatttc
gaaattctgctggcccgtgaagacaagatgccgttccccatcaccgatgaggaagaaatc
tatttctatggccgcctgccgctgtgggtttattacaagaattccttctacccggtacag
accgggctagaacccaagctcgtacaggccatggtggagcagaaacccatcgtaccgcat
gcggacgtgtccgaattcctggaccgcgtctggacacagattcctgtttccgccctgtat
ggccaggaagacttccttgaacgcgtcggccccatcttccaggacgccgagtacgatccc
aagctgtaccttgatgaagaaggttccctgctggttctcaagattcagaacatctacacc
aacgaacatggtgaattcgtcatgcccggtcccaacccggatctgcaaaccggcagctat
catgagggtggcaaatcttatcttatccgccgtgcgcaggatgaggaagcacagctgttc
gctgaattgcaggacatgaatttccaggccagaaacaaccacatctggttcatggagcag
gaggaagcgatcaacttcctgctcgactattacccgcaactggttgaggcctatagagtt
ttcggcgaacagaacctgactcgctacaaagttcgcaccacacagcctcaggttgtggcc
gaggtcgagacagacgaagaagagaaatggttcaacctcgaactgtcggtggaatacgac
gatcagcgcgttcccatcgatgttatctgggaagcctggaccaagggcaaacgctatgtg
cagctcaaagacggctcgtacacaagtctgcccgaatcgtggctcaacaagctgggccac
aaactcaaggcgcttggctttgacccggaaaaggcacccaagcagcacttcaatcaattc
gagacccctgttcttgaaaagattctggaagacctgccccaggcccagactgatgaattt
ttcgttaaactcaaagagaagatcaacaacttcgacgagatcaagatcattgagcagcca
gaggccctgcaggccacgctcagaccgtatcaggctcagggattgagctatctcaacttc
ctgcgtgaatacggtttcggcggcatcctggctgatgaaatggggctgggtaaaaccatc
cagactctttcatacatccagtcgctggtggatagagggatcgaaggcccgaacctgatc
attgtgccgacttccgtgttgcccaactgggagcgagaggcgcaaaaatttgttccgacg
ctgaagctgctgaccatttacggcgccaagcgcgaaggacttttccagcacatcaaggat
tcgaacatggtcatcacgacctatgcgctgctccgtcgtgatctggacgagttgctcaag
ttcgaatacgccagcgtcattcttgatgaagcacaaaacatcaagaatcccaatacgatc
acagcccgatccgtgcgcaaactgcaagcgggactgcgcgtctgcctgtctggtacgcca
attgaaaacaatctctttgagctgtggtcactgtttgaatttctcatgcccggattcctc
gggtcgcagcactccttccaacgcggcatcgtcaaacccatcaaggatggcgacgaggaa
acgctggaatacctgcgcacccgcgtcaagccgttcattcttcgccgcaccaaggcggaa
gtcgccaaagacctgccgcccaagatcgagacgacccattattgcgaactggtcgacgaa
caacgcgagctttacaatgctctggccaagaagctcaaggatcaggtcctgcgcgatgtc
gaggagaaaggcatggccaagagccagatgtccatcctggacgccctgctcaaactgcgc
caaatctgttgccatcctcgtctgctcaaactcgacatgcctggcgtgtccaccaacctg
ccctcaggcaagttcgacgcattcaaggatcttatcgtcgatatcattgacggtggacac
aaggtgttggtcttctcccagttcgtgaagatgctccacgtcattcgcaactggttgcag
attcgagagattccctttgcctatctggatggatcatcaaaggatcgcttcgagcaggtg
gatcgtttcaacgatagtccggatattccgattttcctcatttcactcaaggcgggcggc
acaggcctcaacctgaccagtgcggactatgtcatccactacgacccgtggtggaacccg
gccgtggaaaatcaggccacagaccgtacgcaccgtatcggccagaaacgtcaggtgttt
gcctacaagatgatctgccagaatactgtggaagagcgcatcctcaagcttcaggaacaa
aaaaaggatgtggccaatgcgatcatccccggtcaatctgcactgaagagcctcaccaga
gacgatctggaaatgttgttcgaaatatag
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