KEGG   Pseudodesulfovibrio sediminis: PSDVSF_01490
Entry
PSDVSF_01490      CDS       T08380                                 
Symbol
rimK
Name
(GenBank) putative alpha-L-glutamate ligase
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
psef  Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:psef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psef03009]
    PSDVSF_01490 (rimK)
Ribosome biogenesis [BR:psef03009]
 Prokaryotic type
  ribosomal protein modification factors
   PSDVSF_01490 (rimK)
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C R2K_3
Other DBs
NCBI-ProteinID: BCS86907
LinkDB
Position
complement(150362..151267)
AA seq 301 aa
MKIVILSRKSSLYSTSALVEAGIKAGHEIEVINPLRCYMNITSHNPSIHYKGKRVEGVDA
VIPRIGASITFFGTAVVRQFEMMDVYSVNESIAITRSRDKLRSLQLLSRKGIGLPVTGFA
SSTKFTGDLIDMVGGAPLVVKLIEGTQGIGVVLAENRQAAESVIQAFQGLKANILVQEYI
NESKGSDIRCFVVGGKVVASMKRTAAGDEFRSNIHRGGSAIPVKITPEERSTAVRAAKIM
GLNICGVDLLRSNHGPVVMEVNSSPGLEGIEKATGIDIAAKIITFIEKNAKPGKTKTRGK
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaattgtcatcttgtcacgcaaaagcagcctctattccaccagcgcactagttgaa
gccggaatcaaagcgggacatgaaatcgaggtaatcaatccccttcggtgttatatgaat
attacgtcgcacaacccaagcatccactacaaagggaaacgggttgaaggcgttgatgcc
gtcattccacgcattggggcttcgatcacatttttcggcaccgccgttgtccgccaattc
gaaatgatggatgtttacagtgtcaatgaatccatcgccatcaccagatccagagacaaa
ctgcgcagcctgcaactgctttcacgcaaaggcattggcctgcccgtcaccggatttgcc
agctccacaaaattcaccggggacctcatcgacatggtcggaggcgctccccttgtagtc
aagctgatcgagggaacccaggggatcggagtcgtactggcggagaaccgtcaggccgcc
gagagcgtcattcaggcattccagggactcaaggccaatattcttgtgcaggaatacatc
aacgagtccaagggctcggacattcgctgcttcgtggtcggcggcaaggtggtcgcctcc
atgaagcgcactgcggccggtgatgaattccgctccaacatccaccgcggcggctcggcg
attcctgtaaaaatcaccccggaggagcgctccaccgctgttcgggctgccaagatcatg
ggccttaacatctgtggcgtggaccttctgcgctccaatcacggcccggtagtcatggaa
gtgaactcctctcccggcctcgaaggcatcgaaaaggcaacgggcatcgatatcgctgcc
aaaatcataaccttcatcgaaaaaaacgccaaacccggaaagaccaaaacacgcggaaaa
ggttag

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