Pseudodesulfovibrio sediminis: PSDVSF_01690
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Entry
PSDVSF_01690 CDS
T08380
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K03733
integrase/recombinase XerC
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psef03036
]
PSDVSF_01690 (xerD)
Chromosome and associated proteins [BR:
psef03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PSDVSF_01690 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
DUF4638
Motif
Other DBs
NCBI-ProteinID:
BCS86927
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Position
173061..174020
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AA seq
319 aa
AA seq
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MSSTNAKRNRKGELVQGFLAFLSVEKGYSEATIRSYGTDLDQFQDFLKTKKHSLETPGRI
TRDHVRGFLAEMHRRQLSKTSMGRKLSSLRAYFKYLLRHKQISKDPTAGIRNPKQEKRHP
QVLNVDQAVAMMEAALDPDPEGLRDMALAEVLYGSGLRISEAIGLDMNDVDSDVIRVVGK
GSKERIVPLSDAAVKRIRRYMEQRHAFLKDDYSEQALFLSVRAGKRLDRRQANRIVAKLG
KLAGLPKDVHPHMLRHSFATHMLEAGADLRSVQELLGHENLTTTQRYTHLDMQRIMQVYD
SAHPRAGETNDDTNNNDTE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaccaacgcaaagcgtaaccgcaaaggggaactcgttcagggatttctcgcg
tttctgtccgttgaaaagggctattcagaagccacgatccgctcatacggtaccgacctt
gatcagtttcaggacttcctgaagaccaagaagcattcccttgaaactcctgggcggatt
acccgtgatcatgttcgggggtttctggccgagatgcaccggcgtcagctttccaagacg
tccatggggcgcaagctttcaagtctgcgggcttatttcaagtatttgctccgacataag
cagatcagcaaggaccccacagcaggcattcgtaatcccaagcaggagaaacggcatccg
caggtgctgaacgttgatcaggccgtggccatgatggaggcggcgcttgatccagacccg
gaagggttgcgcgatatggcactggcagaggtgttgtatggatcagggttgcgcatcagt
gaagcgatcggactggatatgaatgatgtggattccgatgtcatccgtgtggtcggcaag
ggtagcaaggaacgcattgttcccttgtcagatgctgctgtaaagcggattcggcggtac
atggagcaacggcatgccttcttgaaagacgattattcagaacaggctttgtttttgagt
gtgcgggccggcaaaagattggatcggcgtcaggccaatcggattgtggccaagctgggc
aagttggccggactgcccaaggatgtgcatccgcatatgctcaggcacagttttgccact
catatgctggaggccggggcagacctgcgcagtgtgcaggaattgctggggcacgagaat
ctgacgacgacccagcgatacacacatctggacatgcagcgcatcatgcaggtatacgat
tccgcacatcccagagcgggagaaacaaatgatgatacaaacaacaatgatacggagtag
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