Pseudodesulfovibrio sediminis: PSDVSF_02210
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Entry
PSDVSF_02210 CDS
T08380
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psef03110
]
PSDVSF_02210 (clpA)
Chaperones and folding catalysts [BR:
psef03110
]
Heat shock proteins
HSP100
PSDVSF_02210 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
TniB
Clp_N
AAA_18
nSTAND3
RuvB_N
AAA_3
AAA_7
IstB_IS21
ATPase_2
Mg_chelatase
NTPase_1
TsaE
AAA_25
Zeta_toxin
AAA_33
AAA_6
AAA_28
T2SSE
AAA_24
Torsin
Motif
Other DBs
NCBI-ProteinID:
BCS86979
LinkDB
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Position
234771..237089
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AA seq
772 aa
AA seq
DB search
MTMLSKELESALTSAVNEVKSRNHEFLTLEHLLYAISIEEQGEEILEACGAEMERLRDQL
GRFFVENMEALPEGTESEVIQTLGVRRVLQRAVWQKKASGKTTVEVGDVLAAMFDEEDSY
AVYFLRTHDVSRLDILEFISHGMSMSEDWNDLGTDHTKPDPLETRPGDKKSPLKEFTVNL
TDRAAEGLIDPLIGRGPELERTVQVLARRRKNNPIYVGDPGVGKTAMAEGLALMVVEGNV
PKEFINAEIYSLDMGSLLAGTKYRGDFEARLKGVLEELKQNKEAILFMDEIHTIVGAGSV
SGGSMDASNILKPLLQSGEIRCMGSTTFEEYKNHFEKDRALSRRFQKIEINEPTVEETVA
ILKGLKPHYEAFHGVNYTHFALKAAAELAERHITDRYLPDKAIDVMDEAGALYKLSTRQR
KGNRIKVADIEKVVARMARIPARRLTMSDRARLQSLEDDLRSVLFGQDEAVAALSQSIKR
SRAGMRQVGRPVGSFLLTGPTGVGKTELARQLANVLDIGFIRFDMSEYMEKHAVARLIGA
PPGYVGFDQGGLLTEGVRKKPHCVVLFDEIEKAHPDVFNILLQVMDYATLTDNNGRKADF
RHVILLMTSNAGAREMSKGAIGFQRNENADREGGALKALEKLFSPEFRNRLDSIVTFKAL
EQPVMELIVDKFVHELNDQLQDRRVVVTLSDKARARLAVLGYDTAMGARPLGRVIQTEIK
DVIADELLFGELVNGGVVSVDVPAKVRKSRKTSTPEEVGEFVFSFEPTGRKQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgactatgctcagtaaggaacttgaaagtgcgttgacctctgctgtcaacgaggtaaag
agcaggaatcatgaattcctcacgctcgaacaccttctctacgctatctccattgaggaa
cagggtgaggaaatcctggaggcgtgtggcgcggaaatggagcgtcttcgtgatcagttg
gggcgttttttcgtggaaaatatggaagctttgcccgaaggcaccgagtctgaggtcatc
cagacattgggtgtgcgtcgggttcttcaacgcgcagtctggcaaaaaaaggcttcgggc
aagaccacggtagaggtcggagatgtcctggccgccatgtttgatgaagaagactcctat
gccgtgtacttcttgcggacccatgacgtttcccgtctcgatattttggaattcatctcg
catgggatgtccatgagtgaggattggaatgatctcggcacagatcacaccaagcctgat
cctttggaaacacgtcctggagacaagaaaagtccgctgaaggagtttacggtcaatctg
actgaccgtgcggccgaagggcttattgatccgctcatcggtcgaggaccagagctggag
cgtaccgttcaggttctggcccgtcgtcgcaagaataatcccatctatgtgggcgatccc
ggtgtgggcaagacagccatggccgaagggttggcacttatggttgtggaggggaatgtt
cccaaggaatttatcaatgccgagatctacagcctcgacatgggctcgcttttggcaggg
accaagtaccgaggtgacttcgaggcacggctcaagggtgtgcttgaagaattgaagcag
aacaaggaagccatcctgttcatggatgaaatccataccatcgtcggtgccggttccgtc
agcggcgggagcatggacgcatcgaatattctgaagccgttgttgcagtccggcgagatc
cgttgcatggggtccacgactttcgaagaatacaagaatcatttcgaaaaggatcgcgca
ctgtcgcgtcgtttccagaaaattgaaataaatgaacccacagtggaagagactgtggct
attctcaagggattgaagccccattacgaggcatttcacggagtcaattacacacatttt
gctctcaaggctgcggctgaactggctgaacgtcatatcactgatcggtatttgcctgac
aaggctattgatgtcatggacgaggctggggcgctctataagctctccacacgtcagaga
aagggcaaccgcataaaggtggccgacattgaaaaggttgtagcccgtatggcccgcatc
ccggctcgcaggttgacgatgtccgacagggcgcgtctgcagagtcttgaggacgatctc
aggtcagtgctttttggtcaggatgaagccgtggcagcgttgtcccagtccattaagcgg
tcccgcgcaggcatgcggcaggtcgggcgtcccgttggcagttttctgcttaccgggcct
accggagtgggtaagaccgaactggcccgtcagttggcaaatgttcttgatatcggattt
atccgtttcgacatgtccgagtatatggaaaagcatgcagtggctcggctcattggtgcg
cctcccggctatgtcggttttgatcagggcggcttgctgaccgaaggtgtgcgcaagaag
ccgcactgtgttgttttatttgatgaaattgaaaaggcgcacccggatgtattcaatatc
ctgttgcaggtgatggattacgccacgctcactgataataatggccgcaaagccgatttc
aggcacgttatcctgctgatgacttccaatgccggagcgcgcgagatgtccaagggcgcc
attgggttccagcgtaatgagaacgctgaccgcgaaggtggagccttgaaggcactggag
aaactcttcagcccggaattcagaaacaggcttgattccatagtgacgttcaaggcgctt
gaacagccggtgatggaattgattgtcgacaagttcgtacatgaattgaacgatcagctt
caggatcgccgggtggtggtgacgctttcggacaaggcccgcgccagactggccgtgctc
gggtacgatacagccatgggggcacgtccccttgggcgggtgatccagaccgaaatcaag
gacgtcattgctgatgagctgctctttggtgagctggttaatggcggagtggtttctgtt
gatgtgccggcaaaggttaggaaatcccgcaaaacctccacaccggaagaagtcggagag
tttgtcttcagcttcgagccaacaggtcggaaacaatag
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