Pseudodesulfovibrio sediminis: PSDVSF_02730
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Entry
PSDVSF_02730 CDS
T08380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDVSF_02730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_02730
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSDVSF_02730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ATP-synt_ab
Mg_chelatase
ATPase
SLFN-g3_helicase
Sigma54_activat
AAA_22
NACHT
NB-ARC
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCS87031
LinkDB
All DBs
Position
complement(283604..284575)
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AA seq
323 aa
AA seq
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MNRPLLDIRKLTTCFASHEGIAKAVDTVSLSFMQGETLAIVGESGCGKTVLALSILGLIP
DPPGRVTEGTILYKDQDLLEMSENELMEIRGNAISMIFQEPMTALNPVFRINDQIAEPLR
LHQGFNKKEALKKAVDALNLVGIPNPAKIATSYPHELSGGMRQRVMIAMALACNPDILIA
DEPTTALDVTIQAQILDLMNELKERINGSLMLITHDLGVVARMAQRVAVMYSGKIIELSD
AKTLYAAPLHPYTQGLLASVPTLGETTRLTPIPGIVPSIFNLPTGCRFHPRCPRKFQKCE
LMVPPLLEPEPGRQVRCWLYEDD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacccttactcgacatacgcaagctgacgacctgctttgcctcacacgaaggt
atagccaaggcggtggataccgtcagcctttcctttatgcaaggggaaaccctggccatc
gtgggcgaatccgggtgcggcaagactgtcctcgcgctctccatactcggactcataccc
gatccgcccggtcgcgtcaccgaagggacgatcctgtacaaagaccaggaccttctggag
atgtctgaaaacgaactcatggagattcggggcaatgccatctccatgatcttccaggag
cccatgaccgcgctgaatccggtcttccgcatcaacgatcaaattgccgaacctcttcga
ctacatcaggggttcaacaaaaaggaagctctgaaaaaggccgtggacgctctcaacctg
gtgggcatccccaacccggccaagatcgccacctcctatccgcacgaactttccggtggt
atgcgccagcgtgtcatgatcgccatggcactggcctgcaatcctgacatactcatcgca
gacgagccgaccacagctctggatgtgaccattcaggcacagattctcgacctcatgaac
gagctcaaggaacgtatcaacggctcactcatgctcataacacatgatcttggtgtagtc
gcgcgcatggcccaacgtgtagccgtgatgtattctggcaaaatcattgaactctcagat
gcaaagacactctatgcggccccacttcacccatatacgcaagggctgctcgcttcagtg
cccacactgggcgaaaccacacgcctgacccccattccggggattgtcccttccattttc
aacctgcccactgggtgtcgcttccatcctcgctgtcccaggaaattccaaaaatgcgaa
ctcatggtacccccacttctggaaccggaaccgggccgccaagttcgatgctggctctat
gaggatgattaa
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