Pseudodesulfovibrio sediminis: PSDVSF_03010
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Entry
PSDVSF_03010 CDS
T08380
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSDVSF_03010 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psef03400
]
PSDVSF_03010 (recO)
DNA repair and recombination proteins [BR:
psef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSDVSF_03010 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSDVSF_03010 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Sterol_MT_C
Motif
Other DBs
NCBI-ProteinID:
BCS87059
UniProt:
A0ABM7P2L3
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Position
313857..314615
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AA seq
252 aa
AA seq
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MNATEKALVLKVGRFREADCWVKLLTPSRGVFNAFAFGGCRSRRRFVGCLDPLSHVLFTI
GSNKTGTYTVLEEGTLLHNFPAVREDPATTGLAVNCMKFIDAVEIDPADARQAYELLLET
LYMLEKGGGSADFTPWLFRAKLVFEMGFQPDFLTCGECGVLVAGQEGCQFGVEKGQVACR
TCLSNGKPLEGLARPISTGVLRALDWIQHSRPADWTTVSMDNEVRRQSSQLIELFVAYHL
GLSWDNGMYKKV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaccgaaaaagctctggtactcaaggtcgggcgctttcgggaagccgattgt
tgggtcaaactccttactccctccagaggcgtattcaacgcctttgcatttggcggctgt
cgcagtcgccgccgctttgtgggatgtcttgatcccttaagtcatgtgctcttcaccatc
ggctccaataaaaccggtacctataccgtgcttgaagagggcacacttctccataatttc
cctgcggttcgagaagacccggccacgaccggactggccgtgaactgtatgaagttcatc
gatgctgtcgaaatcgatccagctgatgccagacaagcgtatgagttgctgcttgaaact
ttgtatatgcttgaaaaaggcggtggcagtgcggattttaccccgtggttgttcagagcg
aagctggtctttgaaatgggctttcaacctgattttttgacatgtggcgaatgtggtgtt
ttggtagccggtcaggaagggtgtcaatttggtgtggaaaagggccaggtggcctgtcgg
acttgtctttcaaacgggaaaccgttagaaggactggctcgaccaatttctaccggcgtc
ttgcgcgctttggactggattcaacacagtcggcccgccgattggaccacggtttccatg
gataatgaagtccggcggcaatccagccaattgatcgagttgttcgttgcgtatcacctg
ggcctgtcctgggacaatggcatgtataaaaaggtatga
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