Pseudodesulfovibrio sediminis: PSDVSF_03510
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Entry
PSDVSF_03510 CDS
T08380
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00020
Citrate cycle (TCA cycle)
psef00620
Pyruvate metabolism
psef00720
Other carbon fixation pathways
psef01100
Metabolic pathways
psef01120
Microbial metabolism in diverse environments
psef01200
Carbon metabolism
psef01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSDVSF_03510
00620 Pyruvate metabolism
PSDVSF_03510
09102 Energy metabolism
00720 Other carbon fixation pathways
PSDVSF_03510
Enzymes [BR:
psef01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
PSDVSF_03510
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_C
Biotin_carb_N
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl
Zn_ribbon_3
HMGL-like
DZR
ATPgrasp_Ter
ATP-grasp_3
DZR_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
BCS87109
UniProt:
A0ABN6EPG3
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Position
364057..367755
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AA seq
1232 aa
AA seq
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MSKSFEEVLKEVKGKRILVANRGIPARRICRSITEMFNAKAIMTATDVDKTSPATSGANE
LLMLGADPRAYLDLDRVIREAKANDVVAIHPGWGFGAEDDSFPAKCKKAGIIFIGPPQEP
MRILGNKVAVRKLAIEQDVPVVPGSEGAVSIPEAREIAKEIGFPVMLKAEGGGGGRGIYE
VYQDEDLENAFAKASALAQASFGNPRLYVEKLLTSIRHIEIQVIADQHGNIFCLDERDCT
VQRNHQKLIEITPSPWPGFTPELRAQLKEYSRRLVAAVGYHSLATVEFLVDTDGVPYLIE
VNTRLQVEHGITECRYGIDIVEEQIAIAFGSTLRFNEETTKPYQWAMQCRINCEDPQKNF
EPNSGRITRYVSPGGQGIRIDSCIGDGYRFPSNYDSAASLLIAYGNSWDKVVSLMKRSLR
EYMIGGLKTTIPFHRKIIDQQRFVDADYNTNFVRDNYAELMDYSDREPDSLRMTRLVAEI
SALGYNKYVQLGEYRGREDKRVGRFELAEPPEVSSWFEPRFSRKMDRDAILDTLRTDREA
GIVHMTDTTTRDITQSNSGNRFRLAEDKIIGPSLDKCGFFSLENGGGAHFHVAMLANMTY
PFMEAAEWNRFAPNTLKQILVRSTNVLGYKPQPKNVMRLTCEMIDEHYEIIRCFDFLNHV
ENMRPFAEVAMNSKRNIFEPAISLSWAKGFDVERYMEVTDNIVAMCADAAGISKKQAEKR
IILGLKDMAGVCPPRFMRELIGAITKKYPELVVHSHRHYTDGLFVPTMGAAADAGAHIVD
VAIGSAVRWYGQGEVLSTAAYIEDEVGLQTHLDKDMIRATSFQLKQIMPYYDKYTAPYFQ
GIDHDVVRHGMPGGATSSSQEGALKQGYIKLLPYMLKFLEGTRKVVRYHDVTPGSQITWN
TAFLAVTGAYKRGGEREVRRLLSIMDIVNLCSESDLTSLERSARLDLYRDANDAFRNLLL
GKFGKLPLGFPEDWVYQSAFGKGWENAIKDRTEESPLVTLVDVDLEAEKKALQNRLHRQP
SEEEFVMYLNHPGDAITTIDFCEKYGNINNLPVDVWFEGLEKGELLQFQGNCKKPHVMRI
LDISEPDENGMCVVRYILDSEIMSHQVKIAEPESGSKDSNEMADPANPYHVGSPSNGDLW
VTHVQPGDRVKEGEELFNISIMKQEKAVLAPMGGTVRRVLKSGNYTEDKKMIPVVEGELL
VELGPDGGVCPTCKAEIANEDANFCANCGQKV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcctttgaagaggtacttaaagaggtcaaggggaagcggattcttgtagcc
aaccggggtattccggccaggcgcatctgtcgttccatcaccgaaatgttcaatgccaag
gcgatcatgaccgccaccgacgttgataaaacctctcctgcaacatctggtgccaatgag
ctgcttatgcttggcgccgaccctcgtgcctatcttgatttggacagggtcattcgtgaa
gccaaggccaatgatgttgtcgccattcaccctggttggggatttggcgcagaagatgat
tcgttcccggcaaaatgtaagaaagcgggcattatatttattggccccccccaggaaccc
atgcgcatccttggcaacaaggttgcggtccgcaagcttgcaattgagcaggacgtgccg
gtcgtccctggttctgagggcgccgtttccattccggaagctcgtgagattgctaaggaa
atcggctttcccgtcatgctcaaggcagagggtggcggtggtggccgtggtatttatgaa
gtctatcaggatgaagaccttgaaaacgcgtttgccaaggcttcggctctggcgcaggct
tctttcggtaatcctcgtctgtatgtcgaaaaactgctgacctccatccgtcatatcgag
attcaggtcattgctgaccagcatggcaacattttctgcctggatgagcgggattgtact
gttcagcggaatcaccagaagctgattgaaatcactccttctccctggcccggtttcaca
ccggaactgcgcgcccagttgaaagagtactcgcgtcgccttgttgccgctgtcggatac
cactctctggccacagtcgaattcctggtggacaccgatggcgtgccgtacctcattgag
gtcaacactcgcctgcaggtggagcacggtatcaccgaatgccggtatggtattgacatc
gttgaagagcagatcgccatcgcctttggctcaacgctgcgtttcaacgaggaaacaacc
aaaccgtatcagtgggcaatgcagtgccgcataaactgcgaggacccgcagaagaacttt
gaacccaactccgggcgtattacccgttacgtttctcccggtgggcagggcattcgtatc
gactcctgcattggagatggataccgcttcccgtccaactatgattccgcagcatccttg
ttgattgcttacggcaactcgtgggacaaagtcgtttccctgatgaagcgttctctgcgt
gagtacatgatcggtggtttgaaaacgactattcctttccatcgcaagattattgatcag
cagcgctttgtcgatgcggattacaataccaattttgtgcgcgataattatgcagagctc
atggactattcggatcgtgagcctgattctttgcgtatgactcgtctcgtggccgagatt
tccgcactggggtacaacaaatacgtgcagctcggtgaatatcgcggacgcgaggacaag
cgagtcggacgttttgaactggcagagccgcccgaagtgtcctcatggttcgagccgcgc
ttttcacgcaagatggaccgtgatgcgatcctggataccctgcgtacggatcgcgaggcc
ggtatcgtccatatgaccgataccaccacccgtgatatcacgcagtccaacagcggtaac
cgtttccgtttggctgaagacaaaatcattggtccgagtctggataaatgcggcttcttc
tctttggagaacggtggcggggcacacttccatgtggccatgctggcgaacatgacctat
ccgtttatggaagcggccgagtggaacaggtttgcacccaacaccttgaagcagattctg
gtgcggtcgaccaatgtcctcggttacaagccgcagcccaagaatgtcatgcggctcacc
tgcgagatgattgacgaacattacgaaatcatccgttgtttcgatttccttaaccacgtt
gaaaacatgcgtccctttgctgaggtcgccatgaattccaaacgcaatattttcgaaccc
gcaatatccctttcctgggctaagggattcgacgtagagcggtatatggaagtcacggat
aatatcgttgccatgtgtgctgacgctgccggcatcagcaagaagcaggctgagaagaga
atcatccttggcctcaaggacatggccggtgtatgcccgcccagattcatgcgtgaactg
atcggcgccattaccaaaaaatatcctgaactggtcgttcacagccatcgtcactacaca
gacggactgtttgtccccaccatgggagctgctgctgatgccggtgcacatatcgttgat
gtggccattggttccgcagttcgctggtatggacagggtgaagtgctttccacagctgcc
tacatcgaggatgaggttggcctgcagacgcatcttgataaggatatgatccgtgcaacc
agcttccagctcaagcagatcatgccttactacgataaatataccgcaccgtactttcag
ggcatcgatcatgatgttgttcgtcatggcatgcctggtggcgcgacctcttcctctcag
gagggggcactcaagcagggctatatcaagcttctgccctatatgttgaaattccttgaa
gggacccgcaaggtggttcgttaccatgacgtgacgcctggttctcagattacctggaat
acggcattcctggctgttaccggtgcatacaagcgtggtggtgaacgcgaggttcgcagg
ttgctttccattatggatatcgtcaacctttgttccgagagcgatctgaccagcctggaa
cgcagcgcccgactcgacctgtatcgtgatgccaatgatgcgttcagaaatctgttgctt
ggcaagtttggtaagttgcccctcggtttccccgaagactgggtttaccagtccgccttt
ggtaaagggtgggaaaatgccatcaaagacaggaccgaggagtcccctcttgtcacgttg
gtggatgtggacctcgaagccgagaagaaggctttgcagaatcgtcttcatcggcagcct
tccgaagaagaattcgtcatgtacctcaaccaccctggcgacgccattaccaccatcgac
ttctgtgagaagtatggcaatattaacaatctgcctgtcgatgtctggtttgaagggctt
gaaaagggcgaactgctccaattccagggtaactgcaagaagccgcacgtcatgcgtatt
cttgatatctctgaacctgatgaaaatggtatgtgtgttgtccgctatattctcgactcc
gaaatcatgagccatcaggtgaagattgccgagccggaatccggaagcaaggacagcaat
gaaatggctgatcctgctaacccgtatcacgttggttcgcccagtaatggcgacctgtgg
gtcacccacgtgcaacctggtgacagggtcaaggaaggggaggagctgttcaacatctcc
atcatgaaacaggagaaggctgtacttgctcccatgggcggtaccgtacgtcgcgtcctc
aagtccggtaactataccgaagacaagaagatgattcctgttgttgaaggggagctcttg
gttgaacttggtcctgatggtggcgtctgccccacatgcaaagccgagatcgccaatgaa
gatgccaacttctgcgccaattgcggacaaaaagtataa
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