KEGG   Pseudodesulfovibrio sediminis: PSDVSF_04250
Entry
PSDVSF_04250      CDS       T08380                                 
Symbol
lysA-1
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef00300  Lysine biosynthesis
psef00470  D-Amino acid metabolism
psef01100  Metabolic pathways
psef01110  Biosynthesis of secondary metabolites
psef01120  Microbial metabolism in diverse environments
psef01230  Biosynthesis of amino acids
Module
psef_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psef00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSDVSF_04250 (lysA-1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSDVSF_04250 (lysA-1)
Enzymes [BR:psef01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PSDVSF_04250 (lysA-1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BCS87183
LinkDB
Position
447589..448827
AA seq 412 aa
MHHFEYRDGSLFAEEVSATKLAEEYGTPLYIYSAATFRRHFQAFDSAFKGLDHLTCFSVK
ANSNLSVLRMLGEEGAGMDIVSGGELYRALRAGIDPGKIVYSGVGKRESEIREALEARIL
MFNIESVAELHKINAVAEEMGTVAKVSFRINPDVDAKTHPYISTGMAKNKFGLDIEHSLE
AYKQAVELKNIDPVGMDCHIGSQLTSIDPFLEALDKLLNFYEKLKDIGVDIKYLDLGGGL
GIPYDEEEPPHPTEFGQALVEKLKALPLKIILEPGRVIAGNAGIMITEVVYTKSNPMKNF
LIVDGAMNDLVRPSLYGSYHRIDEVEKNGRETDIFDVVGPICESSDFLARDRELPKMEQG
ERLVVFSAGAYGFTMASNYNTRPRACELIVDGDKVLVARKRETYEDLIENEI
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcatcattttgaataccgcgacggctccctctttgctgaagaggtcagcgctaccaag
ttggctgaagaatacgggactcctttgtatatttattccgccgctacgttcaggcgtcat
tttcaggcctttgactctgccttcaaaggccttgaccatttgacgtgtttttcggtcaag
gcgaactccaacctgtctgttctcagaatgttgggcgaagaaggcgccggcatggatatc
gtctccggtggcgagctgtatcgtgctttgcgagccggtattgaccccggcaaaatcgtc
tactcgggcgtgggcaagcgcgaatccgagatcagagaagcattggaagcgcgcatcttg
atgttcaacatcgaatctgtcgctgaattgcacaagattaacgccgtggctgaagaaatg
ggtacggttgccaaggtcagtttccgcatcaacccggatgtggatgccaagacccacccc
tatatttcaaccggcatggctaaaaacaaatttggtctggatatcgaacattcactggaa
gcctacaagcaggcagtggaactcaagaacattgatcccgtgggcatggattgtcatatc
ggctcccagctgacctcaattgatccgtttttggaagccctggataaactgctgaatttt
tatgaaaaattgaaagatattggtgtggatatcaagtatcttgatctcggtggtggactt
ggtatcccctatgacgaagaggaaccgccccaccctacggagtttggtcaggctcttgtt
gagaaactcaaggcattaccgctcaagatcattctcgagccgggccgtgtcattgccggt
aacgccggcatcatgatcaccgaagtcgtctataccaaatccaaccccatgaagaatttt
ctcattgtggatggcgccatgaacgatctggtacggccgagcctctatggctcctaccac
cgtattgatgaagtggaaaaaaatggtcgtgagaccgatatctttgacgtagtcggtcct
atttgcgaatccagtgattttctcgcccgggatcgcgaactgcccaagatggaacagggg
gaaagattggttgtcttctccgctggagcgtatggtttcacaatggcttcgaactacaac
acccgtcctcgggcctgcgagctcatagtggatggagacaaggtgcttgtagccagaaaa
cgtgaaacatatgaagatcttatagagaacgaaatctaa

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