Pseudodesulfovibrio sediminis: PSDVSF_05610
Help
Entry
PSDVSF_05610 CDS
T08380
Name
(GenBank) OMP85 family outer membrane protein
Organism
psef
Pseudodesulfovibrio sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
ShlB
V_ATPase_I_N
BRCA2
Motif
Other DBs
NCBI-ProteinID:
BCS87319
LinkDB
All DBs
Position
complement(586611..589322)
Genome browser
AA seq
903 aa
AA seq
DB search
MIINLARKVAMCAIAVLLLTTAAWAAVGMDQDVKVAVLPFKVNAGDDLAYLEESLPELLN
DRLVEAGFKVVEPEEVKRILDEKGITTFDSTSAREVALLTGASFSVYGSLNQIGDNLTMD
ARLVDAYGTGAGKKISVSKEGLINLLPAVDALVARMRTDLLRLDVVAEVDVAGTKVLDKE
VVLMRMTMQKGDLLSADAVNTALKNVYDLGYFDNVEVLISDVDDGKKVIFDVTEKPRIQA
LGVRGAEEIDSEDILEAVSTKKGGVVNPKVLADDIRVIREMYRKEGYYKAKVTHEIEDSG
TGVARLTFVIDEGPQLYIENVIIDGAEQMDPDDIKSILALQERGMLSWVTDSGVLKEELL
ERDASAIMAFYQSKGFLTARVGRPEVKINDDGIDVIYKVHEGDRYLMGKTYFKGDLIDDS
DKLIGLVKINTLNEEGEYFDRTLLKGDVDSLTAYYNNYGYAYTEVAVNLQDDAETKVVDV
VFTITKHQRVHIRRVLLEGNTVTRDNIVMREMRLADGDLFSGDKLKRSHQRLTQLDYFEK
IDIAPVPTGNPEEMDLVVKVKDKATGKVSGGIGYSTYDGPFFAGEISERNLFGRGYEIGF
NGKIGSSTAYVAHFTNPHIDDTDLGFGVTAYNTDTEFSSYDKAAIGSKLRFFYPIGEYTK
LNWSYGFEYYKIKNVDSNADDSVKDDAGEHTASTLAAAVTRDTRDSFMNTTTGTKTTLKI
TFGGGPLGGTDDFVKYVGSYNWWYPLFEEFVFHSKFWGGYVHENLNSTEIPTAQRFELGG
VGTIRGYDNYSIIPTANSTSSATIGGDKAFYTNLEIKRPISKDLGIVMFGFFDAGNAWKE
GEMLFESVTRYGSKPTLGLYKSVGTGINWYSPMGPVGLVYGYALDDLDNNGRHKIELLMG
QTF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatcattaatctcgctcgcaaagttgcgatgtgcgcgattgctgtactcttgttgaca
acagcggcttgggccgcggtaggaatggatcaggacgttaaggtcgctgtgttgccgttt
aaggtaaacgccggcgatgatttggcatatcttgaggagagcctgccggagctgttgaat
gatcgattggttgaagctgggttcaaggtcgtagagcctgaagaggtgaagcgaattctt
gatgagaagggcataacaacctttgattcgacttctgcgcgtgaagtggccctgctgaca
ggtgcctctttctctgtatatggctccctgaatcagattggtgataatctgacaatggac
gcccgcctggtcgatgcctatggcacaggagctggcaagaaaatttccgtgagcaaggaa
gggcttatcaatctgttgcccgcagttgacgcactggttgcccggatgcgtacagacttg
cttcgtctggacgttgtcgctgaggtcgatgtcgctggcaccaaagtgctggacaaggaa
gtcgtgctcatgcgtatgaccatgcagaagggggacctgctttctgctgatgcagttaat
actgctcttaaaaatgtttatgatcttggctatttcgataatgtcgaagtgttgatttcc
gatgtggatgacgggaagaaagtgatatttgatgtcactgaaaagcctcgtattcaggct
ttgggcgttcgtggtgccgaggaaattgattccgaggacattctcgaagccgtatcgacc
aagaagggtggggtcgtgaaccccaaggtcctcgcagatgatattcgtgtcattcgagag
atgtatcgcaaagaagggtactacaaggccaaggtcacgcatgagattgaggattccggt
accggtgttgctcgtctgaccttcgtgattgatgaagggcctcaactctacattgaaaac
gtcatcattgatggtgccgagcagatggatcctgatgatattaagagcatcctggccctt
caggagcgcggaatgctctcttgggtcactgactcgggtgtgctgaaggaagaactcctg
gaacgagacgcttctgccatcatggcgttttatcagagtaagggatttcttaccgccagg
gtcggccgccctgaagtcaaaatcaatgacgatggtatcgatgtcatttacaaggtccac
gagggagaccggtatctgatggggaaaacctatttcaagggtgatctcattgatgattcg
gataaactgattgggcttgttaagatcaatacactgaacgaagaaggcgagtattttgat
agaaccttgctcaagggtgatgtcgattcacttactgcctattacaacaactatgggtat
gcctacaccgaagttgccgtaaatcttcaggacgacgctgaaaccaaggttgtcgatgtc
gtctttacgattaccaagcatcagcgtgttcatatcaggcgtgttttgctggagggcaac
actgtcactcgggacaacatcgttatgcgcgagatgcgccttgccgatggagatctgttt
agtggtgacaagttgaaacgttctcaccagcgtttgacccagttggattattttgaaaaa
attgatatcgctccggtccccacaggtaatcctgaggaaatggaccttgtcgtcaaggtc
aaggataaagccactggtaaggtgagtggcggtatcggatactcgacctatgatggcccg
ttctttgccggtgaaatatctgaaaggaaccttttcggtagaggctatgagattggtttc
aatggtaagattggtagctcgaccgcctatgttgcccatttcaccaatccgcatatagat
gatactgatctcggttttggcgttacggcatacaatacagacaccgaatttagctcttat
gacaaggctgccataggctccaagcttcgtttcttctaccccataggcgaatatacaaaa
ctcaattggtcctatgggtttgaatattacaagatcaagaatgttgacagcaatgcagat
gattcagtcaaagacgacgccggtgaacataccgcttcgactctggctgcagcagtcacc
agagatactcgtgacagttttatgaataccactactggtaccaagacgacgttgaaaatc
acgtttggtggtgggccgttgggtggtactgatgacttcgtgaaatatgtcgggtcatac
aactggtggtatccgcttttcgaagagtttgtcttccactccaagttctggggcgggtat
gtgcatgagaatctgaacagcacggaaatcccgactgcccagaggtttgagcttggtggt
gtcggaactattcgtggttatgacaactattcgattatcccaacggcaaactcgacgtca
tctgctaccatcggtggtgacaaggcgttttataccaaccttgaaatcaagcgtccgatc
agcaaggatttgggcatcgtcatgtttggattctttgatgccggtaacgcctggaaagag
ggcgagatgctctttgaatcagtgacgcgttatggtagcaaaccgactcttggattgtac
aagagtgttggtaccggcataaactggtactctcccatgggaccggttggcttggtctac
ggctatgcattggatgacctggataacaatgggcgtcacaagatcgaattgctcatgggt
caaaccttttaa
DBGET
integrated database retrieval system
