Pseudodesulfovibrio sediminis: PSDVSF_05640
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Entry
PSDVSF_05640 CDS
T08380
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSDVSF_05640 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psef01007
]
PSDVSF_05640 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psef03016
]
PSDVSF_05640 (lysS)
Enzymes [BR:
psef01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PSDVSF_05640 (lysS)
Amino acid related enzymes [BR:
psef01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PSDVSF_05640 (lysS)
Transfer RNA biogenesis [BR:
psef03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PSDVSF_05640 (lysS)
Prokaryotic type
Other AARSs
PSDVSF_05640 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCS87322
UniProt:
A0ABN6EPG5
LinkDB
All DBs
Position
complement(591241..592824)
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AA seq
527 aa
AA seq
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MGQNKKKNKKIKLATKSVHAERFMPMLEALQAKDELNAVIKSRVEKACLLLDDGIDLYPN
DFKRDNEVQQILSDHGETDGEALESLDLEYTIAGRVVSYRSFGKVTFFHLQDRTGKIQVY
AARDELGVEAYQRFKKTDIGDIVGVTGGLFRTKTGELTVKTKTFKLITKSMRPLPEKHHG
LKDVETRYRQRYVDLIVTPKTTEIFKARTAIIREMRNILDEKGFMEVETPMMQAIPGGAT
AKPFETHHNALDMKLYMRIAPELYLKRLLVGGFERVYEINRNFRNEGTSTQHNPEFTMLE
FYWAYANFENLMDLTEEMFSRIATKVTGSSVVTYQGVEVDLSIGAWTRMPFHESLEKIGG
VPPEIYMDYDKCRDLVKEKGEKTVEGEKLGKLQAKLFDLLVEPKLIQPHFIYHYPTDISP
LSRRNEANPEITDRFELFMTGRELANAFSELNDPVDQRGRFEIQVEEKEAGDEEAHFMDE
DYVRALEYGMPPAAGQGIGIDRLVMLLTDSASIREVILFPLLRPEAG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
ttgggacaaaataagaaaaagaataagaaaatcaagctcgcaaccaagtccgtacatgcg
gaaaggttcatgccaatgcttgaggcgcttcaggccaaagatgaacttaacgctgtaatc
aagtcgcgcgttgaaaaagcatgtctgttgcttgacgacggtatcgatctttaccccaac
gattttaaacgggataatgaggttcagcagatattgagtgaccatggcgagacggatgga
gaggcgcttgagagcttggatctcgagtacaccatcgcaggtcgtgtggtctcttatcgc
tcgttcggtaaggtcaccttctttcatctccaggatcgaaccgggaaaattcaggtctat
gcggccagagacgagttgggtgttgaggcttatcaacgcttcaagaaaaccgatatcggc
gacatcgtcggtgttaccggcggcctctttcgtaccaagaccggtgaattgaccgtaaag
accaaaactttcaaactcattacgaaatccatgcgtccgttgccggaaaagcaccatggc
ctcaaggacgtggaaactcgctaccgccagcggtatgtggatctcatagtgacgcccaag
accacggaaattttcaaggctcgtaccgcaattattcgtgagatgcggaacatccttgac
gagaagggcttcatggaagtggaaacacccatgatgcaggccattcccggtggcgccacg
gccaagccgtttgagacacatcataatgctctcgacatgaagctctacatgcgtattgca
ccggagttatacctcaagcgattgctggttggcggattcgagcgggtatatgagatcaac
aggaactttcgcaacgaaggcacctcgactcagcataaccctgaattcaccatgcttgaa
ttctattgggcgtatgccaacttcgaaaatctgatggatttgaccgaagagatgttctcc
cggattgccacaaaggtgacaggttcatccgtggtgacctatcaaggagtcgaagtcgac
ctgtccatcggagcctggactcgcatgccgttccatgagtcgctggagaagatcggtggc
gtgcctcctgagatctatatggattatgacaaatgtcgtgatctggtaaaagagaaaggc
gagaagacggtcgagggtgaaaagctcggcaagctccaggccaagctctttgatctgctg
gttgagccgaagctcatacagccacactttatctatcattatccgacagatatttcgccg
ctgtctcgtcgcaacgaagccaatccggaaataaccgaccgcttcgagttgttcatgaca
ggccgcgagttggccaatgcattttctgaattgaatgaccccgttgatcaacgaggccgt
ttcgaaattcaggtggaagaaaaggaagccggtgatgaggaggcccacttcatggacgag
gattatgttcgtgcccttgaatacggtatgccacccgctgccggtcagggtataggtatc
gatcgtcttgtcatgctcctgacagacagcgcctccattcgggaagtcatcctcttcccg
ctactcaggccagaggccgggtag
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