Pseudodesulfovibrio sediminis: PSDVSF_06200
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Entry
PSDVSF_06200 CDS
T08380
Symbol
lytS
Name
(GenBank) transcriptional regulator
KO
K07704
two-component system, LytTR family, sensor histidine kinase LytS [EC:
2.7.13.3
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_06200 (lytS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psef01001
]
PSDVSF_06200 (lytS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psef02022
]
PSDVSF_06200 (lytS)
Enzymes [BR:
psef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PSDVSF_06200 (lytS)
Protein kinases [BR:
psef01001
]
Histidine kinases
LytTR family [OT]
PSDVSF_06200 (lytS)
Two-component system [BR:
psef02022
]
LytTR family
LysS-LysR
PSDVSF_06200 (lytS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF_2
GAF_3
HATPase_c_2
HATPase_c_3
DUF697
GAF
ECF-ribofla_trS
Motif
Other DBs
NCBI-ProteinID:
BCS87378
LinkDB
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Position
complement(641752..643485)
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AA seq
577 aa
AA seq
DB search
MHSEQLIITLAERFGLLVGAVFLLLTFTPVKRFGFARTSTKNRTLLLTIFFGLFGILGTY
TGNSVFQSVANLRAMAVITGGLFGGPVVGIGAGLIAGGHRILFDLHGFSAYPCGIATFME
GLVAGYIAYRFGDRTMTWKVAAPLALVGEALHMGLVLLLSRPFGDAVELVKLIAPPMIAV
NTFGVAILVELINVFFYNRERRESLHAQQILDIANLTVSHLRSGLNQDSALQTALIIHER
VQMAAVAVTDTRNVLAHVGAGSDHHLSGLPIHTEATREVVRTGRPSYIDNRTAIGCDVAD
CPNTSAIIVPLTKAGQIVGTLKFYGSEVSPLNNTLFELCKGLGKLFSTQLELEDLRIKEH
MLAHAEIRRLQAQINPHFLFNSLNTIGSFCRTNAEKARELLLDLSLYMRKNLDSSRGFIP
LSDELDQVRSYLAIEQARFGDRIDVHWDIDETCAGWPIPPLIIQPLVENSVKHGILGRSH
GGSVTITASRKDDKLHICVTDNGSGMNTAQIHSLLEKIALTGHPGLDSCREGIGIRNCAS
RLEQIYGPDCQLDILSHPGEGTQVSFSIPKNPLNAVA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgcattccgaacaactcattattaccctggcagaacgctttggtctgcttgtcggcgcg
gtctttttgttgctgacctttacacctgtgaaaaggttcggctttgctcgtacctctacc
aaaaatcgaacactgctgctgacgatctttttcggcctgttcggtatccttggcacctac
acgggcaactcggtctttcagtctgtggccaacctgcgggccatggcggtcattaccggc
gggctgtttggtgggcctgtggtgggtatcggggccgggcttatcgccggagggcatcga
attctttttgatctgcacgggttcagcgcctatccctgtggcatagcgaccttcatggaa
ggactcgttgccggatatattgcctaccggttcggggatcggacaatgacatggaaagtc
gctgcaccgcttgcgcttgttggcgaagcgctgcatatggggctggtgctcctgctttcg
cgcccctttggtgatgccgttgaactggtcaagcttatcgctccgcccatgattgccgtg
aatacgttcggcgttgccattctggtggagttgatcaatgtctttttctataatcgagag
cggcgggagtcgttgcatgctcagcagatactggatattgccaatctgaccgtcagccat
ttgcgatccggcctgaatcaggattccgctctgcagacagcgttgattattcatgagcgg
gtgcagatggcggctgtggctgtcacggacaccagaaacgtgttggctcatgtgggagca
ggcagtgatcaccacctgtccgggttacctatccataccgaggccacacgagaggtcgtt
cgaacagggcgaccttcttatattgataataggacggccattggctgcgatgtggcggat
tgtccgaataccagtgccatcatcgtgcccctgacaaaggcggggcagattgtcggtacg
ctcaagttttatggcagcgaagtttcaccgctcaacaatactctttttgagttgtgcaaa
ggattgggcaagctcttttccactcagcttgaactggaagacctgcgtatcaaggagcat
atgctggcccatgcggaaatccgtcgtcttcaggcgcagatcaatccccattttctcttc
aattccctgaacaccatcggttcgttttgtcgtaccaatgcggagaaggcccgtgaattg
ttgctcgatctgtcgttgtatatgcgtaaaaatcttgactccagtcgtgggtttattccc
ctgtccgatgagctggaccaagtgcgttcataccttgccatcgaacaggctcgtttcggc
gatcgcatagacgtgcattgggacattgatgaaacctgcgcaggttggcctattccccct
ctgatcattcagcccttggttgaaaacagtgtcaaacatggcatcctggggcggagccat
ggcggttcggtgaccattacggcgtcacggaaagacgacaagctgcatatctgtgtcact
gataacggcagcgggatgaatacggctcagattcattcgcttcttgaaaaaatagccctg
acagggcatcccgggttggattcatgccgcgaaggtatcggtattcgcaactgcgcctca
cgtctggagcagatttatggccctgactgccagttggacattctcagtcatccgggagag
gggacgcaggtcagtttttccattccgaaaaatccattgaatgccgtagcgtga
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