Pseudodesulfovibrio sediminis: PSDVSF_06410
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Entry
PSDVSF_06410 CDS
T08380
Name
(GenBank) flagellar biosynthetic protein FliR
KO
K02421
flagellar biosynthesis protein FliR
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSDVSF_06410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psef02044
]
PSDVSF_06410
02035 Bacterial motility proteins [BR:
psef02035
]
PSDVSF_06410
Secretion system [BR:
psef02044
]
Type III secretion system
Flagellar export apparatus
PSDVSF_06410
Bacterial motility proteins [BR:
psef02035
]
Flagellar system
Flagellar assembly proteins
Type-III secretion
PSDVSF_06410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_export_1
Motif
Other DBs
NCBI-ProteinID:
BCS87399
LinkDB
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Position
661477..662265
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AA seq
262 aa
AA seq
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MDFFGFNPSNILSFFLTLFRISVVLFLMPFFGGKSIPNLVKGAVMLVLSMALWPKLSFPG
SMMPVGWDIVIMFIGELLLGLILGMLINFLFAAVQLGGQIVGFQMGFSMVNVVDPITGTS
NAVTAHFLYMCTMLTFLVLNGHLFLINAMAMSFDYIPPGGLLLSQNLVTNLLDFSNIMFV
LAIKIAAPIMAALFLVDLALALISRAAPQMHVLVLGFPIKITVGFFFLGFIFTIMSQYVG
DFLTTWNHMNENILKLGSPLNF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttggattcaacccgagtaacatactcagcttttttctcacactgttcaga
atcagtgtggtcctcttcctgatgccttttttcggaggaaaatccatcccgaatctggtc
aaaggcgcagtcatgctcgtgctctcaatggctctttggccaaagctctcctttcccggt
tcaatgatgccggtagggtgggacatagtcatcatgttcatcggcgaacttctgctcggc
ctcatccttggcatgctcatcaactttctgtttgctgcggtacaacttggtggccagatt
gtcggcttccagatgggcttttccatggtcaacgttgttgatcctatcaccggcacaagc
aacgccgtcacggctcacttcctctacatgtgcaccatgctgacctttcttgttttgaat
gggcatctctttctcatcaacgccatggccatgagttttgactacatccctcccggaggt
cttctcctgagtcaaaatctcgttaccaatctccttgatttttccaatatcatgtttgta
ctggccatcaagattgccgctccgatcatggctgccctcttcctggtcgaccttgcattg
gccttgatctccagagcagcaccgcaaatgcatgtcctggttctcggatttccaatcaaa
atcactgttggatttttctttctcggatttatttttaccatcatgtcacagtacgtcggc
gactttctcaccacgtggaaccatatgaatgaaaacatcctgaaactcggttctcccctg
aacttctaa
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