Pseudodesulfovibrio sediminis: PSDVSF_06460
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Entry
PSDVSF_06460 CDS
T08380
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
psef02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_06460 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSDVSF_06460 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psef03021
]
PSDVSF_06460 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psef02035
]
PSDVSF_06460 (fliA)
Transcription machinery [BR:
psef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSDVSF_06460 (fliA)
Bacterial motility proteins [BR:
psef02035
]
Flagellar system
Flagellar assembly proteins
Stator
PSDVSF_06460 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_r3
UPF0122
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
BCS87404
UniProt:
A0ABN6EQK5
LinkDB
All DBs
Position
667378..668163
Genome browser
AA seq
261 aa
AA seq
DB search
MAILSSSGKNSSSKNDPWLDLEKGVKKWDEFSPRDRENIVRFYAPKIRILALRLKAKLPQ
SVELNELISAGSLGLLDALSKFNPELRIKFDTYSENRIKGAMLDELRRMDWFSRGLRQKV
KVLEDAMRQIEHETGRPATAEQLQHHTGMTEKEVQNGLEALHNQVCLSLDSFQENLIGQK
NMTDDEPFQSAAFQEIVDKVANLIEELTPREKLVISLYYGEELNMKETAEVMDITEGRVS
QLHSQALIKLRKTFRDRYENE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaagttcttctggaaaaaactcctcttccaagaacgatccgtggcttgat
ctggaaaagggcgtcaaaaaatgggacgagttctcacccagagacagggagaacatcgtc
cgcttctacgcgcccaaaattcggattctcgctctcagactcaaggcaaaactgccgcaa
agtgttgaactcaacgagctcatcagtgcaggtagtcttggtctgcttgacgccttgagt
aagttcaatccggaattgcgcatcaagtttgacacgtactcggaaaaccgcatcaaggga
gccatgctagacgagttgcgccgcatggactggttttcgagagggctcaggcaaaaagtc
aaagtgctcgaagacgccatgcgtcaaattgagcatgaaacaggtcgtccggccactgcg
gagcagctgcagcaccacacaggcatgaccgaaaaagaggtgcagaatggacttgaagca
cttcataatcaagtgtgtctgagtcttgatagttttcaggaaaatttaataggtcaaaaa
aacatgactgatgatgaaccatttcagtctgcggcctttcaggagattgttgacaaagta
gccaatctcattgaagaattgacgccaagagaaaaattggtcatatctttatattatggc
gaggaattgaacatgaaggaaactgccgaggttatggacataaccgaaggtcgggtttcc
caactgcattctcaagcattgattaaattgagaaaaacgttccgagaccgatatgagaac
gaatag
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