Pseudodesulfovibrio sediminis: PSDVSF_07630
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Entry
PSDVSF_07630 CDS
T08380
Name
(GenBank) transglycosylase
KO
K08304
peptidoglycan lytic transglycosylase A [EC:
4.2.2.29
]
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
PSDVSF_07630
Enzymes [BR:
psef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSDVSF_07630
Peptidoglycan biosynthesis and degradation proteins [BR:
psef01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSDVSF_07630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MltA
3D
Motif
Other DBs
NCBI-ProteinID:
BCS87521
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Position
complement(775104..776324)
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AA seq
406 aa
AA seq
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MVRYFCFLLLCIVFFSLQGCGPEPVKPLPVDDKPGFVALDEGDAESLARSLSTRLQGLGS
WTDLAPGLEKNLRYLRTRPQDAVCVSKPGLALTWGQVTQSVEELLGMLGELQANPRLVAE
RFQWLKVSPGTLLTGYYEPWLEASLSPDEGFKYPLYEKPDDLKQVNLGAFHPRWKGQTLV
YKEGKDGIEPYYDRRAIDGSRVLEGKGKEIAWAKDPVDVFFLQIQGSGRLDLQDGTYKHI
LYAGKNGHRYVSLGKLLIERGYIPKEEMSMQRIRTFLEANPDIARELLFENPSYVFFKLA
DDGPYGSIGSILIPRVSVAVDRSMIPLGSVSVLKTALMNYETGETDPFLSLVLAQDTGGA
IQGTRMDLFCGTGVQAETLAGHLQEDSEVFMLVSKKALETTVSQLK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttcgttatttctgttttttgttgctgtgtattgtctttttttctctccaagggtgt
ggaccggaaccggtcaagccgcttcccgttgatgacaagcccggttttgtcgcgctggat
gaaggtgatgccgaatcattggccaggtcgctttccacgcgtttgcagggattggggtca
tggactgatctggcgccgggattggagaagaatctccggtatctccgtacccgacctcag
gatgctgtctgtgtcagtaagcccggtcttgccttgacctggggacaggtgacgcagtcc
gttgaagaattgctcggcatgctgggcgagttgcaggcaaatccccggcttgtcgccgaa
cgtttccaatggctcaaggtgtcgcccgggacattgttgaccggatactatgagccgtgg
ctggaagcgtccctctcgcctgatgaagggttcaagtatccgttgtacgaaaaacccgac
gatttgaagcaggtaaaccttggcgcctttcatcctcgctggaaagggcagaccctggtg
tataaggaagggaaggacggtattgaaccgtattatgaccgacgggctattgacggcagc
agagtgctggaaggaaagggcaaggaaatcgcctgggcaaaggatccggtagatgtgttc
tttttgcagattcaggggtcaggccggttggacctgcaggacggcacttataaacatata
ttatatgccggcaagaacggccatcgctatgtctccttgggcaagttgctcatcgagcgg
ggctatatacctaaagaagagatgtccatgcagcggattcgcaccttccttgaggcgaat
ccggatattgcgcgggaactgcttttcgaaaaccccagttatgtcttcttcaagttggcc
gatgacggtccgtatggttccatcggttcaattctcattccccgcgtcagtgttgccgtg
gacaggagcatgattccgcttggcagtgtgtcagtgctcaagacggctctcatgaattat
gaaacgggtgaaacagacccgttcctgtctcttgttctggcacaggacacggggggagcc
atacagggaacgcggatggatttgttttgcggaacaggcgtccaggcggagactttggcc
ggtcatcttcaggaagattccgaagttttcatgctcgtgagtaaaaaagcacttgagacg
accgtgtctcagttgaagtag
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