Pseudodesulfovibrio sediminis: PSDVSF_08290
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Entry
PSDVSF_08290 CDS
T08380
Symbol
fdrA
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00020
Citrate cycle (TCA cycle)
psef00190
Oxidative phosphorylation
psef00620
Pyruvate metabolism
psef00650
Butanoate metabolism
psef00720
Other carbon fixation pathways
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
psef01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSDVSF_08290 (fdrA)
00620 Pyruvate metabolism
PSDVSF_08290 (fdrA)
00650 Butanoate metabolism
PSDVSF_08290 (fdrA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PSDVSF_08290 (fdrA)
00720 Other carbon fixation pathways
PSDVSF_08290 (fdrA)
Enzymes [BR:
psef01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSDVSF_08290 (fdrA)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
PSDVSF_08290 (fdrA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BCS87587
LinkDB
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Position
complement(841508..843343)
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AA seq
611 aa
AA seq
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MQTIYTDFLVVGAGLAGERAAVEAADAGFSAICLSLVPARRSHSSAAQGGMQASLGNSVM
GEGDCPDVHFADTVKGSDWGCDQEVARLFADAAPIEMRRLAHWGVPWNRVVPGKSIYYKG
GKQFEKIEAEDKEGLIMARSFGGTAKWRTCYTSDGTGHAVMCTMDNRCAQMGVEVHDKTE
AIALLQDGETCYGVVARCLRTGELLIYLSKATMIAAGGFGRIYPNTTNAVICDGGAHTMC
VDTGVVPMGNMEAVQFHPTGIVPTDILVTEGCRGDGGTLLDVDEKRFMDVYEPEKAELAS
RDVVSRWMTYHMREGHGVKSSYGEHLWLDIRHLGEEHITGKLREVYEICTSFLGINPIHQ
LIPVRPTQHYSMGGIRTNKDGAAYGLKGLFSAGEAACWDMHGFNRLGGNSLAETVVAGGI
IGRKIAEYLQGCETEFKTSLINDEVKKQQARIDALINCTNGSENVYKVRKAMQDALHKGA
NIFRTQEGLETCVASLQDTLIRAKNVGLRSDGRGVNPELASALKLEGQVKMALMVAYGAL
QRTESRGSHNREDFTARNDRDWLSRTLAYWKNEGDTLPTLEYEPATVAVEIPPGDRGYGH
SEIISADDKKE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcagactatttacaccgattttctcgttgtcggcgcaggtctggcgggcgaacgcgct
gctgttgaagcggcagacgccggattctccgccatctgtttaagccttgttccggctcgc
cggtcccattcctcggctgctcaggggggcatgcaggcctcgctcggcaactccgtcatg
ggagaaggcgattgccctgatgttcactttgccgacactgtcaaaggctctgactggggc
tgtgatcaggaagtggcccgtctgttcgcagacgccgctcccatagaaatgcgccgcctt
gcccattggggcgtgccctggaaccgtgtcgttcccggcaagtccatttattacaagggc
ggcaagcagtttgaaaagatagaagccgaagacaaggaagggctaatcatggcccgctcc
tttggcggcacagccaaatggcgtacctgctatacttcggatggtacaggccatgcggtc
atgtgtaccatggacaaccgttgcgcccagatgggtgtcgaagttcacgacaaaaccgaa
gccattgcgctgcttcaggatggcgaaacctgctatggcgtggtcgcccgctgtctgcgc
acaggcgagctgctgatatatctgtccaaggcgaccatgatcgctgccggtggtttcgga
cgcatttacccgaacaccaccaatgcggttatctgtgacggtggagcgcacaccatgtgc
gtcgataccggcgtggtgcccatgggcaacatggaagccgtgcagtttcatcccacaggc
attgtcccgacagatattctcgtgacagagggctgtcgtggtgacggcggtacgctgctc
gatgtagacgaaaaacggttcatggatgtgtacgaaccggaaaaggccgagctcgcttct
cgagacgtggtctcccgctggatgacctatcacatgcgcgaggggcacggcgtcaaatct
tcgtacggtgagcatttgtggttggatatccgccacctcggtgaggaacacatcaccggc
aagctccgtgaagtgtatgagatctgtacttccttcctgggcatcaaccccattcatcag
cttattccggtccgtccgacccagcattattccatgggtggcattcgtaccaacaaggat
ggcgcggcatacgggctcaaaggtttgttctccgctggtgaggccgcttgttgggatatg
cacgggttcaaccgccttggcggtaactccctggccgagactgtggttgccggtggtatc
atcggtcgcaagatcgccgaatacctccagggctgcgagaccgagttcaagacttcgctc
atcaatgacgaagtcaagaagcagcaggcaagaatcgacgcactcatcaactgcaccaac
ggttctgagaatgtctacaaggtccgcaaggccatgcaggacgcactgcacaagggtgcc
aacatcttccgtacgcaggaagggttggagacctgtgtcgcttccctgcaggatactttg
atcagggccaagaatgtggggctccggtccgacggcaggggcgtgaatccggagctggct
tcggcgctcaagctcgaaggtcaggtcaagatggccttgatggtcgcctatggcgcactg
caacgcaccgagtcccgtggttcgcataaccgtgaagacttcaccgcacgcaacgatcgc
gattggcttagccgcacactggcttactggaagaacgaaggcgacacgttgccgacgctc
gaatacgaaccggccactgttgccgtggagattcctccgggagaccgtggatacggacat
tccgaaatcatcagcgccgacgacaagaaggaatag
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