Pseudodesulfovibrio sediminis: PSDVSF_09020
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Entry
PSDVSF_09020 CDS
T08380
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00730
Thiamine metabolism
psef01100
Metabolic pathways
psef01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PSDVSF_09020 (thiC)
Enzymes [BR:
psef01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PSDVSF_09020 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Kinocilin
Motif
Other DBs
NCBI-ProteinID:
BCS87660
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Position
complement(917036..918343)
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AA seq
435 aa
AA seq
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MASYTTQMDAARKGIVTPQMETVARKENIRIEDLMERMAKGTVIIPANKNHPNLDAEAVG
EGMRIKINVNLGISKDCAEIEPELVKVQAALDMKAEAIMDLSCYGKTQEFRKALVAMSPA
MIGTVPIYDAVGFYDKNLQDITVDEFFDVVQKHVEDGVDFLTIHCGLNKHTAEKVKQGGR
LTNIVSRGGSLLFTWMEINNAENPFYEHFDRLLDICEEYDVTLSLGDGCRPGCLHDATDA
CQVEELITLGELTKRAWERNVQVMIEGPGHMAMNEIAGNMMMEKRLCHGAPFYVLGPLVT
DVAPGYDHITAAIGGAIAGAAGADFLCYVTPAEHLRLPTLEDMKEGIVATRIAAHAADIA
KGYPGATDWDDNMSKARAALDWNAMFDLAMDPVKPTEYRESSKPEHEDSCSMCGKMCAVR
NMNRVLEGKDIQLDD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatatacaactcagatggacgcagctcgcaaaggcattgtcaccccgcagatg
gaaactgttgcccgcaaggagaacatccgtatcgaggacctcatggagcgcatggccaag
ggaaccgttatcatcccggccaataagaatcatcccaacctcgacgctgaagccgttggt
gaaggcatgcgcatcaagattaatgtcaacctgggcatttccaaggattgtgctgagatt
gagccggaactggtcaaggtgcaggctgccctcgacatgaaggccgaggccatcatggac
ctctcctgctacggcaagacccaggaattccgtaaggctctggttgcaatgtccccggcc
atgatcggtacggttcccatctacgatgccgttggtttctatgacaagaaccttcaggat
atcactgtggacgagtttttcgacgtggtgcaaaaacacgttgaagacggtgtggatttc
ctgaccattcactgcggattgaacaaacatactgcggaaaaggtcaagcagggcggtcgg
ttgaccaatatcgtgtctcgcggcggttcccttttgtttacctggatggagatcaataac
gccgagaacccgttttacgagcactttgatcgtctgctcgacatctgcgaagagtacgat
gtcacattgagccttggtgatggctgccgtcccggttgtctgcacgacgccacggacgcc
tgtcaggtggaagaactcatcacgctgggcgagctgaccaagcgcgcctgggagcgcaat
gttcaggtcatgatcgaaggccccggccatatggccatgaatgagatcgcaggcaacatg
atgatggaaaaacggctgtgccacggtgcgccgttctatgtcctcggcccgctggtcacc
gatgttgctcccggttacgatcacatcaccgctgccattggtggcgccattgccggtgct
gccggtgcggacttcctctgctatgtcaccccggccgagcacctgcgtctgcctactttg
gaagacatgaaggaagggatcgttgccacacgtattgccgctcacgctgccgatatcgcc
aagggatatcccggtgccacggactgggatgacaacatgagcaaggctcgtgctgccctg
gactggaatgccatgttcgatctggccatggacccggtcaagcccacagaataccgagag
tcttcaaagcccgagcatgaggactcctgctccatgtgcggcaagatgtgcgctgtgcgc
aatatgaaccgtgtgttggagggcaaagacatccaactggatgattag
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