Pseudodesulfovibrio sediminis: PSDVSF_09110
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Entry
PSDVSF_09110 CDS
T08380
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSDVSF_09110 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psef03400
]
PSDVSF_09110 (priA)
Enzymes [BR:
psef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSDVSF_09110 (priA)
DNA repair and recombination proteins [BR:
psef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSDVSF_09110 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
PIF1
AAA_16
nSTAND_NTPase5
IBR_1
Glyco_tran_WecG
AAA_22
SLFN-g3_helicase
T2SSE
SRP54
nSTAND6
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BCS87669
UniProt:
A0ABM7P4F8
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All DBs
Position
complement(924543..926909)
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AA seq
788 aa
AA seq
DB search
MADLWQVTLVSPPYQAWTYERPSYFPDLSPGQRVIIPFGKSHRAGVVIGPAEAAPEGVEI
KSMIWPLERSVILSEDYVDMAVNLASRQMVNVGRILEIALPRGLRTAAVTFRVDKHMSAR
KLPASVRPSALVKYDDEDKAALMELWLAGRMRVRVNAKKEAEERFVSLESDPPWAVRPNA
KRQLRLLNHLLENGPQSLYGLKYALGDWVSDTAAKLEEAGIVRIGELTADSMAGVDEGKS
VCVESEQCAFALTDEQQVALDEMTTAMQNGGGAHLVHGVTGSGKTVLYLEMAQRYLEVGK
SVMLLAPEVALACQLYRNVAARFPGVQTYFYHGYQSPKKRQATFQALARGTEPALVVGTR
SSLFLPVHDLGMIVLDEEHDESYKQEERLAYHAKEVAWFRTARSHALLLLGSATPDVKTF
NAASQGLITVSTIKERVGDTVLPEVELVDISSLKDPDKPLAGSTVEAITAAVEAGEQVIV
MLNRRGYAPIMYCLDCTETVRCPDCEVGMTYHKGRERLVCHYCGLSYSYPLTCKKCGGAN
FLPMGGGTERLEEVVQKILPEGTTVLRLDRDATRRQERLEEILGAFGRGEAQVLVGTQMI
SKGHHFPGVTLVVVADGDLGLNLPDYRSTERTFQLLVQVAGRAGRGENPGRVLIQTRNPS
HPIWSEILTADYSGFQKREIGRRQMFNYPPFSKMALVRLSYPVKYDEGKDAVGLIGQILR
DEGKKMGMSVLGPAPAPLSVLRARKRFNCLIKADDWAKVRTVFSQAVRANPNPNMVRLVL
DLDPLSTL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctctggcaggtaacgctagtcagtcctccgtatcaggcgtggacatatgag
cgtccttcgtattttcccgacctctctccggggcagcgggtcatcattccctttggcaaa
tcccatagggcgggcgtggttatcgggcctgccgaggcagcgccggagggagtggaaatc
aaatccatgatctggccgttggagcggtctgtcattttgtctgaagactatgtggacatg
gccgtgaatctggcttcgcgtcagatggtcaatgtggggcgtattcttgaaatagctctg
cctcgcggtttgcggaccgcggcagtgacgtttcgagtggacaagcatatgtcagcacgg
aagctcccggcgtccgttcgtccgtcagctcttgtcaaatatgatgacgaggacaaggca
gcgctcatggagctgtggctggccggacgcatgcgcgtacgcgtcaatgcgaagaaagag
gcggaggagcggtttgtttcgcttgaatctgatccgccgtgggccgtgcgccccaatgcc
aagcgacagctccgtttgcttaatcatctgctcgaaaacggtccgcagagtctgtatggc
ctgaaatacgccttgggtgattgggtgtccgatacggctgccaagctcgaagaagcgggc
atagtccgtattggcgagctgaccgccgacagcatggccggtgtggatgaaggcaaaagc
gtgtgcgtcgagtccgagcagtgtgccttcgcgttgacggacgaacagcaggtcgctctt
gatgaaatgaccacggccatgcagaacggcggtggggcgcaccttgtgcatggagtgacc
ggcagcggcaagaccgtgctctatctggagatggcgcagcggtatctggaagtgggcaag
tccgttatgctccttgcgccggaggtggctctggcctgccagttgtatcggaatgtggcc
gcgcgttttccgggcgtacaaacatatttttatcatggatatcagagtccgaagaagcgg
caggccacgttccaggctctggccagggggacagaaccggcgttggttgtcggtacccgt
tcttcgttgtttttgcccgtgcatgacctgggcatgatcgtcctcgacgaagaacatgat
gaatcctacaagcaggaagagcggctggcctatcatgccaaggaagtggcctggttccga
acggcccggagccatgcgttgctgctgctcggttcggccacgccggatgtgaagacgttc
aatgcggccagccagggactcatcactgtgtccaccatcaaggaacgggtgggagacact
gttttgcctgaagttgagctggtggatatttccagcctcaaggatccggacaagcccctg
gcagggtcaacggtagaggcgattaccgcggcggtggaagccggagagcaggtcatcgtc
atgctgaaccggcgtgggtatgcgccaatcatgtattgtctggattgcacggaaaccgtg
cgctgtccggattgtgaagtgggaatgacctaccacaaggggcgtgaacggctggtctgt
cattattgcggtctctcctattcctaccccctgacgtgcaagaaatgcgggggagcaaat
ttcctgcccatgggcggcggcactgaaagactggaagaagtcgtgcagaaaatccttcct
gaagggacgactgttctgcgtctggatcgggatgccaccaggcggcaggagcggctggag
gaaatccttggcgcgtttggtcggggcgaggcgcaggtgttggtcggcacgcagatgatt
tccaagggacaccattttcccggtgtgacattggtcgtggtggccgacggcgatctggga
ttgaacctgcctgattaccgttcaacggagcggacatttcagttgttggtacaggtggcg
gggcgtgccgggcgcggtgagaaccctggcagggtgcttatccagacgcgcaatccttcg
catcccatatggagtgaaatcctgaccgcagactacagcgggttccagaagcgggaaatt
ggccgtcgtcagatgttcaattatcctcctttttcaaaaatggcgctggtacgcctcagt
tatccggtcaagtatgatgaaggaaaggatgccgtcggattgatcggtcagattttacgc
gatgagggtaagaagatgggtatgagcgtgcttgggccggcccctgcaccgctttccgtg
ctgcgggcgcgcaagcggttcaattgtctgatcaaggctgacgattgggccaaagtgcgc
acggtcttcagccaggctgttcgggccaatcccaaccccaacatggtgcgtttggtgctt
gatctggacccgttgtccacattgtaa
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