Pseudodesulfovibrio sediminis: PSDVSF_09920
Help
Entry
PSDVSF_09920 CDS
T08380
Symbol
selA
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00450
Selenocompound metabolism
psef00970
Aminoacyl-tRNA biosynthesis
psef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PSDVSF_09920 (selA)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSDVSF_09920 (selA)
Enzymes [BR:
psef01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
PSDVSF_09920 (selA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Pro_dh
Motif
Other DBs
NCBI-ProteinID:
BCS87750
UniProt:
A0ABM7P4I0
LinkDB
All DBs
Position
complement(1016385..1017791)
Genome browser
AA seq
468 aa
AA seq
DB search
MSQLFRHLPSMDQVLAGLCAVTEFKSLPRPLVKDLVNEFLDVCREEIRGEVLTAVEQLSL
DALLPRLKAYVRAKARPHFRRVLNGTGVVIHTNLGRSLLAKPAIQAVAEACGHYSNCEFD
LSTGQRGSRYSHVEKILCDITGAEAALVVNNNAAAVFIMLETLAKGREVIVSRGQLVEIG
GSFRIPDVMTKSGAVLHEVGATNRAHVHDYENAINDETGALMRVHTSNFRVVGFTKEVSQ
PEMRALGDKYNLPVIEDLGSGTLYSLEGAGLLGEPTVQQTVAQGADVVSFSGDKVLGGPQ
AGIIVGRKRYIDRIKKNPINRAMRIDKMTLAALEATLRLYLDMEEARRTVPTLKMITASQ
DALKSKARRLVDAIRDQLGDRATVSMKKGMSRVGGGAFPEYDLPGTMVTVGVQNISVGDL
KNALLDTDPPLVARIEDDLFLLDPRTLTASELKLAASALRQAVDRLTS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattattcaggcatttgccgtccatggatcaggttttggccggactgtgcgct
gttacggagttcaagagtctgccccgtcctctggtcaaggatcttgtcaacgagttcctt
gatgtctgtcgcgaggagattcgcggcgaggtccttactgcagtcgaacagttgtcgctg
gatgcgcttttgccgcgattgaaagcgtatgttcgggccaaagcccgtccgcacttcagg
cgggtcctcaacggcacaggtgttgtcattcataccaatctcgggcgttccctgctggcg
aaaccggccattcaggctgtggccgaggcgtgcggccattattccaattgtgaatttgat
ctgtctacaggccagcgtgggagccggtattctcatgttgagaaaattctgtgtgacatt
accggtgccgaagctgcgttggtggtcaacaacaatgccgctgccgtgttcatcatgctg
gagacgctcgccaagggaagggaagtgatcgtatctcgcggtcagctggtggagatcggc
ggatcattccgcatacccgatgtcatgaccaagtccggcgcggtcctgcatgaagtgggg
gccaccaatcgggcgcatgttcatgactacgagaacgcgatcaatgatgaaacgggtgcg
ctcatgcgggtgcatacctcgaatttccgtgtggtgggatttaccaaggaagtgagccag
cctgaaatgcgcgcactgggcgacaaatacaatctaccggtcattgaggatctgggcagt
gggacgctgtactctctggagggagcggggttgctgggtgaacccacggtgcagcagacc
gttgcccagggagcggacgtggtctccttttccggtgacaaggtgctcggtggaccgcag
gcaggcatcattgtcggccgtaaacgatatatcgaccgtatcaagaaaaatccgatcaac
cgcgccatgcgtatcgacaagatgacgctggccgctttggaagcgacgttgcgtctgtat
ctcgatatggaagaggcgcggcggacggtcccgacactgaagatgatcaccgcctcacag
gacgcgctcaagagcaaggcgcgcagattggtggacgccattcgcgaccaactgggcgat
agggctacggtgagcatgaagaaaggcatgtcccgcgtgggcggtggcgcgttccctgag
tacgatttgcctgggaccatggtgaccgtgggtgtacagaatatttcggtgggcgatctg
aagaatgcgctgctggatacggacccgccgctggtggctcgtatcgaggacgacttgttt
cttcttgatccccgcacattgaccgcttcagaactcaagctcgctgcttctgccctccgg
caggcggtagacagattgacctcataa
DBGET
integrated database retrieval system
