Pseudodesulfovibrio sediminis: PSDVSF_11350
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Entry
PSDVSF_11350 CDS
T08380
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSDVSF_11350 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psef01007
]
PSDVSF_11350 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psef03016
]
PSDVSF_11350 (thrS)
Enzymes [BR:
psef01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
PSDVSF_11350 (thrS)
Amino acid related enzymes [BR:
psef01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PSDVSF_11350 (thrS)
Transfer RNA biogenesis [BR:
psef03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSDVSF_11350 (thrS)
Prokaryotic type
PSDVSF_11350 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
BCS87893
UniProt:
A0ABN6ENQ6
LinkDB
All DBs
Position
complement(1170505..1172442)
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AA seq
645 aa
AA seq
DB search
MQVDVAGKQIELADGAVCADALAEGLSKKQFKKVVAAKCGDTVVDLSTAVSGTCTTIEPV
FADSEEGLGVIRHSAAHLMAEAVKKLFPAAMVTIGPSIENGFYYDFDYERPFTPEDLEAI
EKEMLSSVGANKEFSRTTMSVDEAKQFFSEKGEDYKPEIMDDLGGDEFSIYTHGDFADLC
RGPHVARTGMIKAFKLLSVAGAYWRGDENKKQLQRIYGTAWQDPKALKKYLFRLEEAKKR
DHRKLGKQLDLFSFNEDVGPGMSLWHPRGMLLRAILEDFERKEHLKRGYDLVQGPLILKR
EMWEKSGHYENYRENMYFTEIDDQAYGIKPMNCLAHMMIYKRKIMSYRDLPQRYFELGVV
HRHEKSGVLHGLMRVRSFTQDDAHLICRPDQVEEEILDLIKFYQDIYALFDYEFDVELST
RPEKSIGSDQDWDVATEGLRQALEKSGMEYQINEGDGAFYGPKIDFHLRDSIGRSWQCGT
IQVDFTLPERFDIVYVGEDGERHRPVMIHRAMLGSIERFIGVLTEHCAGAYPVWMAPVQA
RLLNVTDAQLDFVKKAKALFASKGIRIEADTRNEKLGFKIREAQVEKIPYMLVIGDTEVE
AGCVNIRSRDGEDPGLVSLEEAAQLILDAAKAPFEAGGMSYSFSG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagttgacgttgctggaaagcagatcgaattggccgacggcgccgtgtgtgccgat
gcccttgccgagggcctgtccaagaagcagttcaagaaggtcgtggccgccaagtgcgga
gacaccgttgttgatctgtctactgccgtttccggaacgtgtactaccatcgagcccgtc
ttcgcggatagcgaagaggggctgggtgttatccgtcactccgcagcccacctcatggct
gaagccgtgaagaagcttttcccggccgccatggtgaccatcggtccctccatcgagaac
ggattttactacgacttcgattacgaacgtccgttcacgcccgaagatcttgaagccatc
gaaaaagagatgctcagctccgtgggtgcgaacaaagagttttcccgtaccaccatgtcc
gttgacgaggccaagcagttcttctccgaaaagggtgaagactacaagcccgagatcatg
gacgacctgggcggcgatgaattttccatatacacgcacggcgacttcgctgatctgtgc
cgcggcccgcacgtggcccgtaccggcatgatcaaggcgttcaagctgttgtccgtggcc
ggtgcatactggcgcggtgacgagaacaagaagcagctccagcgcatctacggaactgcc
tggcaggaccccaaggcgctcaagaagtacctgttccgcctggaagaggccaagaagcgt
gatcaccgcaagctcggcaagcagcttgacctgttctccttcaacgaagacgtcggcccc
ggcatgtctctgtggcatcctcgcggcatgctgctgcgtgccattctcgaagacttcgag
cgcaaggagcacctgaagcggggatacgatctcgttcagggaccgctcatcctgaagcgc
gagatgtgggagaagtccggtcactacgagaactatcgtgagaacatgtacttcacggag
atcgacgatcaggcgtacggcatcaagcccatgaactgcctggcgcacatgatgatctac
aagcggaaaatcatgagctaccgtgatctgccccagcgatatttcgagctgggcgtggtg
catcgtcacgagaagtccggtgtgttgcatggtctcatgcgcgtccggtccttcacacag
gatgatgcgcacctcatctgccgccctgatcaggtggaagaagagattctcgatctcatc
aaattttatcaggacatctacgcactgttcgactatgaattcgacgtggagctgtccacc
cgtccggagaagtccatcggctctgatcaggactgggatgtggccaccgaagggctgcgt
caggcgcttgaaaaatccggcatggaataccagatcaacgaaggcgacggtgctttttac
ggtcccaagatcgattttcatctgcgcgattccatcggacgttcctggcagtgcggtaca
attcaagtggatttcaccttgccagagcggtttgacatagtatatgtcggcgaggatggt
gaacggcacaggcccgtcatgatccatcgcgccatgctcggctccatcgaacgcttcatc
ggcgtcttgacggagcattgtgctggtgcgtatcctgtctggatggctccagtacaggcg
cgtttgctgaacgtgacagatgctcagcttgattttgtaaagaaagccaaggcgttgttt
gcatcaaaaggtattcgtatcgaagcggatacgcgcaacgagaagcttggattcaagatt
cgggaagctcaggttgagaaaatcccgtatatgttggtaatcggtgatacagaggtggaa
gccgggtgcgtcaatattcgttcacgagacggagaagaccccggattggtttcattggaa
gaagccgcgcagttgattttggatgctgcgaaggctcctttcgaagcaggaggcatgagc
tatagcttttcggggtaa
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