Pseudodesulfovibrio sediminis: PSDVSF_11790
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Entry
PSDVSF_11790 CDS
T08380
Name
(GenBank) hypothetical protein
Organism
psef
Pseudodesulfovibrio sediminis
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BCS87937
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Position
1216983..1219634
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AA seq
883 aa
AA seq
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MSLKERLNFDTEPVYLIDGTALLYRAFYARADLSRSDGFPTNAINTVLRVLMNLLKDENP
THVAFMMDGKGPTFRNEKYDLYKANRPSMPEPLAQQIEPVQEGVKLLGLKLLISDGVEAD
DCICALANRYKKDRPVIIMASDKDLKQCLDDNVVMISQHGRKETIYTLDGFREKEGMEPD
TWPDFQAIIGDSADNIPGIPKVGPVTARKIFAETGPTLEDVQENYTRLPDKLREKIEPEL
ENIFLYRELTRMKTDCCDQPVEEFIVKDINTDKLSAFLDEYELRGLQRNIPRPKKADTLP
AAAATAAKSKAGGDGMLSLFGDAPAAEKPEAPLAVTEAATADALPSLAGEDVGLTFEDDT
FFVGLMDTEYRYTGPVPDLVRALENASIIATPSVQELLRADSSWNYILSSQWFDLSLAAY
LLDPESRNYTWARLKQSMFQDGRPEFAQPAKDLHPHSKGLAALAYMQGIKNQVEGAELTR
LMVELEIPLIPALVEMEKAGIGIDLTAFQEFLGDVSSQLAELTRTIIELAGEEFNIRSSQ
QLAVVLFDRLDIKAGGKTSTGLRSTANQVLEKIRDKHPIVEAVLQYRMLEKLRSTYLEPL
PKLVDADSRLHTHFNQLSTATGRLSSSRPNLQNIPIRGIHGPRMRGCFCAGEGNMLAAAD
YSQIELRVLAHFSKDPALLDAFRNDEDIHSRTAALLNDKAVEDVTTDERRGAKTINFGLI
YGMGVQKLARELKIKQTEAKEFTETYFEKMATLKAYYETIVEDAQTHGFVTTLAGRRRLL
PELHSRNNQLASQAKRQAVNTVIQGSAADIIKMAMVAAYKDQELKKLGAQLILQVHDELI
VEAPAKNIEAAGARLKQIMQDVAKLDVPLKVDLGIGKNWAEAH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaaaagaacgcctcaatttcgatacggaacctgtctacctcattgacggtact
gccctgctctacagagcattctacgcccgcgccgacttgtcccgttcggacggttttccg
accaatgcgatcaatacggtcctgcgcgtcctcatgaacctgctcaaggatgaaaacccc
acccatgtggccttcatgatggacggcaaagggccaacgttccgcaatgaaaaatatgat
ctgtacaaggcaaatcgtccgtccatgcccgaaccgctggcccagcagatcgaaccggtg
caggaaggggtcaaactcctcggcctcaagctgctgatctcggatggtgtcgaggccgat
gactgcatctgcgcactggccaatcgttacaagaaagaccgcccggtgatcatcatggct
tcggacaaggacctcaagcaatgccttgacgacaatgtggtcatgatcagccagcatgga
cgaaaggaaaccatctatacgctggacggattccgtgaaaaagaaggcatggagcctgac
acgtggccggattttcaggcaataatcggtgactcggccgataacatccccggcattccc
aaggtcggcccagtgaccgcacgcaagatttttgccgagaccggccccaccctggaggat
gtacaagagaattacacccgcctgccggacaagctgcgcgagaagatcgagcctgaattg
gaaaatattttcctttaccgcgaactgacccgcatgaagaccgactgctgtgatcagcca
gtggaggaattcatcgtcaaggatatcaataccgacaagttgagcgcattcctggacgaa
tatgagctgcgcggacttcagcgtaatattccccgtccgaaaaaggctgacacgctcccg
gcagcggcagccaccgcagcgaaaagcaaggccggtggtgacggcatgctgtcacttttc
ggcgacgccccggcagcagagaagcccgaggctccccttgccgttaccgaagcagcaact
gcggacgccctgcccagcctggcaggtgaagacgtgggattgacctttgaagacgacacg
ttttttgtcggcctgatggacacggagtaccgctacaccggtcccgtgcccgatctggtc
cgcgcccttgagaacgccagcatcatcgccacgccgtcggtgcaggagttgcttcgcgcc
gactcatcgtggaattatattctttcatcccaatggtttgatctgagtctggccgcatac
ctgctggacccggaatcccgaaactacacttgggcccgcctcaaacagtccatgtttcag
gatggtcgcccggaatttgcccagcccgccaaagacctgcacccgcactccaaaggactg
gccgcgctggcctatatgcagggcataaagaatcaggtggaaggcgcggaattgaccagg
ctcatggtcgagctggaaatcccgctcatcccggcgctggtggagatggaaaaggccggt
atcggtattgatctcacggcattccaggaatttctgggcgatgtcagcagccagcttgcc
gaattgacacgaacgatcattgaactcgctggcgaggagttcaatatccgctccagccaa
cagttggccgttgttctgttcgacaggctggatatcaaggccggtggcaagacctccacc
gggttgcgctccaccgccaaccaggtgcttgaaaagattcgcgacaaacaccccattgtg
gaggcggtgctccagtatcgcatgctggaaaaactgcgctccacctaccttgaaccactg
cccaaactggtggatgcggattcacggctgcacacccatttcaatcagctttcaacagcc
acgggccgcctttccagctcgcgaccgaacctgcagaatatcccgattcgcggtatacac
ggcccacgaatgcgcggctgtttctgtgccggagaaggcaacatgctggccgcagcagac
tactcccagatcgaactcagggtgctggcccatttctccaaggacccggctttgctggat
gccttccgtaatgatgaagatatccactctcgcaccgccgctctgctcaacgacaaggcc
gtggaagacgtgaccaccgatgagcgacgcggagccaagaccatcaacttcggtctgatc
tatggcatgggtgtgcaaaagctcgcccgcgaactcaagatcaaacaaaccgaagccaaa
gaattcacggaaacctattttgaaaagatggcgaccctcaaggcctactacgagaccatt
gtggaagacgcgcaaacgcacggcttcgtgaccactcttgccggacgccgccgcctgctc
ccggagctgcactcccgcaacaaccagctcgcatcccaggccaaacgccaggccgtgaac
acagtcattcaaggctcggcagccgacatcattaaaatggccatggtcgcggcctacaag
gatcaggaactcaaaaaactcggcgcacaactcatcctgcaagtacacgatgaactcata
gtggaagccccggcaaagaacatagaagccgccggagctcgactcaaacagatcatgcag
gacgtagccaagctggatgtaccgctcaaggtagatttaggaataggaaagaattgggct
gaggcgcattaa
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