KEGG   Pseudodesulfovibrio sediminis: PSDVSF_12400
Entry
PSDVSF_12400      CDS       T08380                                 
Name
(GenBank) channel protein TolC
  KO
K12543  outer membrane protein, adhesin transport system
Organism
psef  Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:psef00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psef02000]
    PSDVSF_12400
   02044 Secretion system [BR:psef02044]
    PSDVSF_12400
Transporters [BR:psef02000]
 Other transporters
  Pores ion channels [TC:1]
   PSDVSF_12400
Secretion system [BR:psef02044]
 Type I secretion system
  Adhesin protein transporter
   PSDVSF_12400
SSDB
Motif
Pfam: OEP DivIVA
Other DBs
NCBI-ProteinID: BCS87998
LinkDB
Position
1301628..1302914
AA seq 428 aa
MSLKDSVVAAVKQHPQIKSLLYNRDAVSKAQLSALGRFFPSLDLAGELGWQQYSNANNRA
NRTDDDTRTPTDVSATLTQNVFDGFDRWNDYQREDARMTSAEGRLVDNVETVALDAIRAH
VDVVRNRRLVALAGENITAHQELLDSISERVEGGAGNRADEMQAKGRVARAETTLVNYVG
ELRTAEAEYTRTVGATPEALGDPEYNPEYIPGTVEQILETTLDNNPKIHVYKAEIEVAER
TKNQLMSTMYPNVDVYAQIRQRDDYDGVDSWVNDKKVMLSASWNVFNGGSDFNDVRTAAA
RIREAKSNLQDTTDDLIRQVASAWAEYESSIGQIEKYQEALQYSLESLDMYLMQFNVGQR
SLLDVLDATNEVFSNKVQLETATSNRNFTLYKFLALEGELMKTLEVASNTYEEIPEEAEM
EPAAAEAQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtccctcaaggacagcgttgttgctgcggtaaaacagcatcctcaaatcaaatctctg
ctctataacagagacgcggtttccaaagctcaactgtccgctcttggtcgattcttccct
tcacttgatcttgcaggcgaactcggatggcagcaatacagcaacgccaacaaccgcgcc
aacaggactgacgatgacacacgtacacccacggatgtcagcgcaacgctgacgcaaaac
gtgtttgacggctttgatcgctggaacgactaccagcgtgaggacgctcgcatgacttcc
gctgaaggtcgtctggtcgacaacgtcgaaaccgtcgccctggacgcaatccgcgcccat
gtggatgttgtccgcaaccgcaggctcgtcgccctggccggtgaaaacatcaccgctcac
caggaactgcttgactccatttctgaacgcgtcgaaggcggcgcaggcaaccgtgctgat
gagatgcaggccaagggccgcgtcgcacgcgccgaaaccaccctcgtcaactacgtcggc
gaactgcgcaccgcagaagcagaatacacccgcactgtcggcgctactcccgaagctctc
ggcgatcccgagtacaatcctgaatacatcccgggcaccgttgaacagattctcgaaacg
actctcgacaacaatccaaaaattcatgtctacaaagctgaaatcgaagttgcagaacgc
accaagaatcagctcatgtccaccatgtacccgaatgtcgatgtatacgctcagattcgc
cagcgtgacgattacgacggcgtcgattcctgggtcaacgacaagaaggtcatgctgagt
gccagctggaacgtcttcaacggcggaagtgacttcaacgatgtccgtaccgctgctgcc
cgtatccgcgaagccaagtccaaccttcaggacaccacagatgacctgatccgtcaggtt
gcctctgcctgggccgaatacgagtccagcatcggtcagatcgagaagtaccaggaagct
ctccagtacagcttggaatccttggacatgtacctcatgcagttcaacgttggccagcgc
tccctgctggacgtccttgacgccaccaacgaagtgttcagcaacaaggtgcagcttgag
actgccaccagcaaccgcaacttcactctgtacaagttcctcgcccttgagggtgaactc
atgaagactctggaagttgcctccaacacatacgaggaaattcccgaagaagctgagatg
gaacctgctgctgcagaagctcagtaa

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