Pseudodesulfovibrio sediminis: PSDVSF_13700
Help
Entry
PSDVSF_13700 CDS
T08380
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_13700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_13700
02044 Secretion system [BR:
psef02044
]
PSDVSF_13700
Transporters [BR:
psef02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSDVSF_13700
Secretion system [BR:
psef02044
]
Type I secretion system
Adhesin protein transporter
PSDVSF_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_22
AAA_29
RsgA_GTPase
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
BCS88128
LinkDB
All DBs
Position
complement(1441754..1443865)
Genome browser
AA seq
703 aa
AA seq
DB search
MVQPSVSTEFRLPGGLAPCIPPLLDALGWRGSDVHLAEAMPHLMDVVDLSDLLNVMANLK
FGSRSMDIRLNHLDVRMFPCLFIDDEGKAMVLSKGDGNTILVFDADTESYNEISPDSRKG
TAFFFAQVDTRGHSLHRKQTKWFSKVIRRFTKPLQQSLFISFLLSLLALTLPLFVMTIYD
QMPFFENNITLAYIVVGVLVFILSDFGLRLIRSGILSFIGARLGNIVGNEVFRRILYMPP
AYTESASIGSQASRIKDFDTVRDFFSGQAFVALLEIPFIIILIAAMWFLGGTVIMVPLIA
ILLFAVLAAIYLPLVKNSNEMMAKSGSARQELVMEMLTKMRAIKLTSTPVMWENRYRQLS
AECAANAYHSSQLASQINALTNTLIMGAGVSTMAMSVTGVINNEMTMGALVACMILIWRI
LAPLRSGFVVMLQVERINKSVKQIDRLMALDIEQLTESQLTLNRELRGDLAFSQVSIRYM
SDAYPALLGVSFSVKHGEVLAIAGHDGAGKSTILKLLMGLYRPQAGRITLSNISLRQMDP
LTLRRSVGYAPQTPQFFYGTIAQNLRLINPMAPEGELIDACLRAGVLDEVEALPEGIHTR
IGDYQMKMMPVAFLKKLNLARTLVRSVPLLLLDEAMERPNFDERDVFLDMLEELRGNATI
VTVTNHAAYLSVADKILWMEKGRVRKFGAPKDILPDLPEEYKC
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaccgtcagtctctactgaatttcggctgccaggcggccttgcaccctgcatc
cctcccttgctggatgctttgggctggcgtggcagtgatgtgcatttggccgaagcaatg
ccccatctcatggatgttgtcgatctgtccgacttgctcaatgtcatggcaaatcttaaa
tttggcagtcggtccatggacatccgtctcaatcatcttgatgtgcgcatgttcccttgc
ttgttcatcgacgacgaagggaaagccatggtgctgtccaagggcgatggcaacaccatt
ctcgtatttgatgcagacactgaatcttacaacgagatcagcccggactctcgcaagggg
acggcatttttctttgctcaagtggacacgagaggtcattcgttgcaccgcaaacagacc
aagtggttcagcaaggtcattcggcgcttcacaaaaccgttgcaacagagcttgtttatc
tcttttttactgagtctccttgctctgaccctgcccttgtttgttatgaccatatatgac
cagatgccgttttttgagaacaatattactctggcgtatattgttgtcggcgttcttgtc
tttatccttagcgatttcgggttgcggcttattcgctccggtatcttgagttttattgga
gcacggctggggaacatcgtgggcaatgaagtttttcggcgcatcctttacatgccacca
gcctataccgaatcagcctctattggctcccaggcatctcgtattaaagattttgatact
gtgcgtgatttcttttcggggcaggccttcgttgcattgttggaaataccttttatcatc
attttgattgctgccatgtggtttcttggtgggacggtcattatggtaccactcatcgca
attctgctttttgctgttctggcagctatctatctgccgctggttaagaattccaatgaa
atgatggcgaagtccggttcggcacgtcaggagctggtgatggaaatgcttacaaaaatg
cgcgccatcaaactgaccagtaccccggtgatgtgggagaatcggtatcgccagctttcc
gcagaatgtgcggccaatgcctatcattcaagccaactcgcttcacaaatcaatgctctg
accaacactttgatcatgggggcgggcgtctcaaccatggccatgtcagtgactggggtt
atcaacaatgagatgaccatgggtgccttggtggcctgcatgatattgatttggcgcatc
ctggctcccctgcggtcgggcttcgtggttatgcttcaggtggagcggatcaacaagtcc
gtcaaacagattgatcgtcttatggccttggatatcgaacagcttacagagtcacaactt
actttaaatagagagttgcgtggtgatctcgcgttttctcaggtttccattcgttatatg
tctgatgcttatcccgcattgcttggtgtctctttctccgtgaagcatggagaggtgctc
gctattgcaggacacgatggtgcgggcaaatccacaatcctcaaacttctcatgggattg
tatcgtcctcaagccggtcgtatcactttgagcaatataagcttacgtcaaatggacccg
cttaccttacgcaggtctgtgggctacgcgccgcagaccccgcaattcttttatggaacc
attgcccagaatctacgccttatcaatcctatggcaccagaaggagagttgatagatgcc
tgtcttcgtgccggagttcttgatgaagtggaagctctacccgaaggcatccatacccgc
ataggggattaccagatgaaaatgatgccagtggcgtttctgaagaaactcaatctggct
cggacattggtccgttcagttcctttgttgcttctggatgaagccatggagcgcccgaat
tttgatgagcgtgatgtcttccttgatatgttggaggagttgcgcggtaatgcaacaatt
gtcaccgtcaccaaccatgcggcttatctctctgtcgcagacaagattctttggatggaa
aagggccgtgtgcgtaaatttggcgcaccgaaagatatcctgcccgatctccccgaagaa
tataaatgctga
DBGET
integrated database retrieval system
