Pseudodesulfovibrio sediminis: PSDVSF_16350
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Entry
PSDVSF_16350 CDS
T08380
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00730
Thiamine metabolism
psef00900
Terpenoid backbone biosynthesis
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PSDVSF_16350 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PSDVSF_16350 (dxs)
Enzymes [BR:
psef01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
PSDVSF_16350 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
PFOR_II
TPP_enzyme_C
E1_dh
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
BCS88393
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All DBs
Position
complement(1716395..1718293)
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AA seq
632 aa
AA seq
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MIKDPKKTVVLSQIHKPGDVRDLEGDQLDVLAQELRDIIISQVSNRGGHLAPSLGVVELT
LALFRSFDLEKDKLVWDVGHQAYAHKLLTGRLDDFSTLRQKGGMSGFPRMAESSYDHFGV
GHSSTSISAALGMAMARDLKGEDHEVVAVIGDGSLTAGLAFEGLNQAGDLGRKMVVVLND
NEMSISRNVGALSQFLSRKMTSPFLQRLKSDVEGLLGTIPKIGDDLAGYAKRYGDSVKSF
FTPGILFEAFHFTYVGPIDGHDTATLVKVFEEVKKLDKPVLVHVMTTKGKGYEPAESDPS
HFHGVGKFTPETGLARKYTGNGLPSYTEVFGATLCSLADKDETIMAITAAMPEGTGTECF
RQNHSDRFVDVGICEQHAVTFAAGLATQGFKPAVAIYSTFMQRAYDQIVHDVCLQNLNVN
LFLDRGGLVGEDGATHHGVYDLSYLRHIPNLVIMAPKDEAELAQMMVTAFAYDGPCAMRY
PRGTGVGASVSASPRKIAIGKGELIRDGKDAVVITLGSRVYPALEAAMELEESGLEVAVF
NTRFVKPLPKKQLLELAGRFDRIVLVEENARMGGFGSAILELLNDADALQGKKVQHLGIP
DEFIEHGTQKELRSMLGIDVTGIKKTVKNLCK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccaaagaagacagtcgtgctgtctcaaatacataagcccggcgatgtg
cgtgacctggaaggcgaccaactggacgtccttgcccaggagttgcgcgatatcatcatc
agccaggtctccaaccggggcggccacctcgcgccctctcttggtgtcgtcgagctgacc
ctcgccctgtttcgatcctttgatctggaaaaggacaagcttgtttgggatgtgggccat
caggcctatgcccacaagttgctcaccgggcggctggacgatttttcgacattgcgtcag
aagggcggaatgagcgggttcccgcgcatggccgagtcctcctatgatcattttggcgtg
ggtcattcctccacctccatttccgccgcgctcggcatggccatggcccgagacctcaag
ggcgaagatcatgaagtggtggccgttatcggcgacggatcgctcacggcagggctcgct
ttcgagggcctgaaccaggcaggcgatctgggtcgcaaaatggttgtggtcctcaatgat
aatgagatgtccatctcccgaaacgtgggcgcactctcccagtttctttcgcgcaagatg
acctcgccgtttttgcagcgcctcaagtcagacgtggaagggctgctgggcaccattccc
aagatcggtgacgatctggccggatatgccaagcgatacggcgattccgtgaagtcgttt
tttacgccgggcattctgttcgaggcgtttcatttcacctatgtaggtcccattgacgga
catgacaccgccaccttggtcaaggttttcgaggaagtgaagaaactcgataaacctgtg
ctcgtgcatgtcatgaccacaaagggcaagggctacgaacccgcggaaagcgatccgtcc
cattttcacggagtgggcaagtttacgcccgaaaccgggctggcgcggaaatataccggg
aacggtctgccgtcctataccgaggtcttcggggccaccctgtgttccctcgcggacaag
gacgagaccatcatggccatcaccgcggccatgcctgagggcaccgggaccgaatgtttt
cgtcagaatcattctgaccgtttcgtggacgtggggatttgcgagcaacacgccgtcacc
tttgcggcggggctggcgactcaggggttcaaacccgcggtggccatttattcgaccttc
atgcagcgggcctatgatcagattgtgcatgatgtctgtctgcagaatctcaacgtgaat
ttatttctggaccgcggtgggctggtgggcgaggacggggccacgcatcatggcgtgtat
gacctgagttatctccggcatatcccgaacttggtcatcatggcccccaaggacgaagct
gagctggcgcagatgatggtcacggcctttgcctatgacgggccgtgcgccatgcggtat
ccgcgtggtaccggcgtgggagcctctgtttccgcttccccccgcaagatcgccatcggt
aagggcgagctgatccgtgacggtaaggatgccgttgtcattactctcggctcccgcgtg
tatcccgctctggaagcggccatggagctggaggaatccgggcttgaagtggctgtcttc
aatacccggttcgtcaaaccgctgcccaaaaagcagttgctggaactggctggcaggttt
gacaggatcgtactggtggaagaaaacgctcgcatgggcggcttcggttccgctatcctg
gaactgttgaacgacgccgatgcgctccagggcaaaaaggttcaacacctcggtatcccg
gacgagtttatcgagcacggcacgcagaaggaattgcggagcatgctcggtatagatgtg
accgggatcaaaaaaacggtcaaaaatctctgtaaataa
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