Pseudodesulfovibrio sediminis: PSDVSF_18220
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Entry
PSDVSF_18220 CDS
T08380
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSDVSF_18220 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psef01007
]
PSDVSF_18220 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psef03016
]
PSDVSF_18220 (valS)
Enzymes [BR:
psef01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PSDVSF_18220 (valS)
Amino acid related enzymes [BR:
psef01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PSDVSF_18220 (valS)
Transfer RNA biogenesis [BR:
psef03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSDVSF_18220 (valS)
Prokaryotic type
PSDVSF_18220 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
DUF7130
ABC_tran_CTD
NCD3G
Motif
Other DBs
NCBI-ProteinID:
BCS88580
UniProt:
A0ABM7P6M4
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All DBs
Position
complement(1901143..1903809)
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AA seq
888 aa
AA seq
DB search
MARKELAKAYEPWDVEEKWENHWEENKTFSPDPDGPGDSYSIVIPPPNVTGVLHMGHALN
LTLQDILCRFNRQQGKNVLWVPGTDHAGIATQNVVERQLKEEGLTRHDLGREKFIDRVWD
WKKEKGDHILSQIRRMGASVDWTRECFTFDEQRAKAVREVFVKLFEEGLIYKGDYIINWC
NRCHTALADDEVEHENKPGHLHHIKYSLSDGSGDLTIATTRPETMLADTAIAVNPEDERF
NHLIGKTAILPLVGKELPIIGDTYVDIEFGTGCLKVTPAHDMNDWELGRKHNLEIITVLD
EDGVVNENAPEKYQGMSVLEARKAVMADLEAEGRVVEVADHEHSVGVCYRCKSTIEPHVS
TQWFVSMKPLAEKARAAVPADTQIFPEHWTKTYYAWLDEIRDWCISRQIWWGHRIPAWTC
EECGELTVTIDDPTHCSKCGSAKIERDEDVLDTWFSSALWPFSTLGWPDDTKELAKYYPT
SCLVTGFDILFFWVARMMMMGLQFKGEVPFKHVYIHALVRDEKGKKMSKSTGNVIDPLDM
IGKYGADALRFTLTSFAAMGRDIKLSEQRIEGYKHFMNKIWNATRFAMMNLPDEIPAVDL
KDADGLANQWILHRLEEVKKSLAEATEEYKFNEIAQTLYKFIWSEFCDWYLEMIKPALYG
EDETAKAATQKVLWTVLSETMVLLHPVTPFITQEIWSVLPRPAGDDRPDDIATLPFPDMR
DECLNPDVVKEMELFMGVVSGTRNIRTELLIEPAKKLDLLIKTVSDADRTVLENNMNLIQ
SLARVNTVSIGPDVVAPKASGAAVVQGNEISVPLEGVVDFESELARLDKNIGKLEKTMKG
VAGKLGNPGFVNNAPEAVVEGEKKKLAEMEEEKTKLVQLKERLESVMG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaaagaactcgcaaaagcctacgaaccgtgggatgtggaagaaaagtgggaa
aaccactgggaagaaaacaagaccttttcgcctgaccctgatggtcctggcgattcgtac
tccatcgtcatcccgccgcccaacgtcaccggcgttctgcacatgggccatgccctgaac
ctgacccttcaggatatcctctgtcgtttcaacagacagcagggcaagaatgtcctgtgg
gtgcccggcaccgaccatgcaggcatcgccacccagaacgtggtggagcgccagctcaag
gaagagggcctcacccgccacgaccttggccgcgaaaagttcattgatcgcgtttgggat
tggaagaaggaaaagggcgaccacatcctgagccagattcgccgcatgggcgcatccgtt
gactggacccgtgagtgcttcacctttgacgagcagcgtgccaaggctgtgcgcgaagtg
ttcgtgaagctttttgaagaggggctgatctacaagggcgattacatcatcaactggtgc
aaccgctgccacaccgcactggccgacgacgaagtcgagcacgagaacaagcccggtcat
ctgcaccatatcaaatattccctgtccgacgggtccggtgatctgaccatcgccaccacc
cgcccggagaccatgctggccgataccgccattgccgtgaaccccgaggacgagcgtttc
aaccacctcatcggcaagaccgccatcctgccgctggtcggcaaggagctgcccattatc
ggcgatacctatgtcgacatcgagttcggaaccggttgcctcaaggtcaccccggctcac
gacatgaacgactgggagctcggtcgcaagcacaacctcgaaattattaccgtcctcgac
gaagacggcgtggtcaacgagaacgccccggagaaatatcagggcatgagcgtgcttgag
gcccgcaaggccgtcatggccgacctcgaagccgagggccgtgtggtggaagtcgctgac
cacgaacattccgtgggcgtctgttatcgttgcaaatccaccatcgagccgcacgtttcc
actcagtggtttgtgtccatgaagcccctggccgagaaggcccgtgccgctgtcccggcc
gatacccagatttttccggagcactggaccaagacctattacgcctggctggacgaaatc
cgcgactggtgtatctcccgtcagatctggtggggacaccgtatcccggcgtggacctgc
gaggagtgcggcgagctgaccgtgaccatcgacgatcccacgcactgttccaagtgcggt
tccgccaagatcgaacgggacgaggacgtccttgacacctggttctcctccgcgctctgg
ccgttctccacgctgggctggcccgacgacaccaaggagctggccaagtactacccgacg
tcctgtctggtgaccggctttgacatcctctttttctgggtcgcccgcatgatgatgatg
gggctgcagttcaagggcgaagtgccgttcaagcacgtctatatccacgcgctggtccgt
gacgagaagggcaagaagatgtccaagtccacgggcaacgtcattgatccgctggacatg
atcggcaagtacggcgcagacgccctgcggttcaccctgacgagcttcgccgccatgggc
cgcgacatcaagctcagcgagcagcgcatcgaagggtacaagcatttcatgaacaagatc
tggaacgccacccgctttgccatgatgaacctgccggacgagatcccggcggttgacctc
aaggacgcagacggactggccaaccagtggattctgcatcgtctggaagaggtcaagaaa
tccctggccgaagccaccgaggaatacaaattcaacgagatcgcccagacgctctacaag
ttcatctggagcgagttctgcgactggtatctggagatgatcaagcccgccctgtatggc
gaggacgagacagccaaggccgccacccagaaggtgctgtggacggtcctgtccgagacc
atggttctgcttcacccggtgacgccgttcatcacgcaggagatctggtccgtgctgccc
cgtcctgccggcgatgatcgccccgacgatatcgcgaccctgccgttcccggacatgcgc
gatgaatgcctgaacccggacgtggtcaaggagatggagctcttcatgggcgtggtctcc
ggcacccgcaatatccgcacggagctgctcatcgaaccggccaagaagctcgacctgctc
atcaagacagtgtccgacgctgacaggaccgtgctcgaaaacaacatgaacctgatccag
tctctggcccgtgtgaacaccgtgtccatcgggcctgacgtggtcgcgcccaaggcctcg
ggcgcagccgtggtgcagggcaacgagatttcggttccgctggaaggcgtggtcgacttc
gagtccgagcttgcccgtctggacaagaacatcggcaagctcgaaaagaccatgaagggc
gtggccggcaagctgggcaatcccggtttcgtgaacaacgcccctgaagcggtcgttgaa
ggcgaaaagaaaaagctcgctgaaatggaagaagaaaagaccaaactcgtccagctcaag
gaacgccttgaaagcgtgatgggataa
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