Pseudodesulfovibrio sediminis: PSDVSF_18330
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Entry
PSDVSF_18330 CDS
T08380
Name
(GenBank) RND transporter
KO
K02005
HlyD family secretion protein
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
PSDVSF_18330
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Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
RnfC_N
DUF5798
Peptidase_M23
HlyD_2
CENP-Q
PDZ_Tricorn
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BCS88591
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Position
1914051..1915142
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AA seq
363 aa
AA seq
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MKKLIFILIAVLITGGGIWYFKGTQSAGKIKVLKTTTIQRGSVTRVLEATGIVKAQVGAQ
VKIGAQATGVLESVPVKVGDHVNKGDLIAQIDARELRARISEAQANLDQAQAKLRYMQKN
LPRQRALVQKHLAAQDTLDVAMQDADMARHAVASSKAIMRTLQVQLTYTKIYSPITGVVS
QVAAQEGETIVSGLSVSNLITVLDPTKLEMWIYIDETDVGRVQEGLPVRYTVDAYRDRIF
EGVVARIYPEPEIRDNIVYYRTLVKVTEDQSEYLRPEMTTQCKIIVETKDDVLTVPNTAL
KWVRDRQVCFVVGPDPKVEPTEVLPTLGLVGLESSEVLEGLSEGDTVATQLVLPGAKVGK
KGI
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcatattcattcttatcgcggtgctcattactggtggtggcatctggtat
ttcaaagggacgcaatccgctggaaaaatcaaagtgctcaagaccactacgatccagcgc
ggctccgtgacccgtgtgctggaggccaccggcatcgtcaaggcgcaggtgggcgcacag
gtcaagatcggcgcgcaggccaccggcgtgcttgaatccgttcccgtcaaagtgggcgac
cacgtcaacaagggcgacctcatcgcacagatcgacgcacgggaactccgcgcccgcatc
agcgaggcacaggccaatctggatcaggcacaggccaagctccggtacatgcaaaagaat
ctgccgcgccagcgcgcactggtgcaaaagcatctcgccgctcaggacacgctcgatgtc
gccatgcaggatgcggacatggcgcgccacgccgtggcctcgtccaaggcgataatgcgc
accctccaggtccaactcacctacaccaagatatactcgcccattaccggcgtggtctcg
caggtggcggctcaggaaggcgaaaccatcgtctccggcctgtccgtgtccaacctcatc
acggtgctggaccccaccaagctcgaaatgtggatatacatagacgaaaccgatgtgggc
cgcgtgcaggagggactgccggtgcgctatacggttgacgcctaccgcgacagaatcttt
gaaggcgtggtggcccgcatctaccccgagccggagatccgtgacaacatcgtctactac
cgcactctggttaaagtgaccgaggatcaatcggaatatctgcggcctgaaatgaccaca
cagtgcaaaatcatcgtcgaaaccaaagacgatgtcctgaccgttcccaacaccgccctg
aaatgggtcagggaccgacaggtctgtttcgtcgtcggtcccgatcccaaagtcgagccg
accgaagtgctgcccacactcggactcgtcggacttgaatcgtccgaagtgctcgaaggg
ttgtccgagggcgacaccgtggccacgcagctggttctccccggcgccaaggtcggcaag
aagggaatctaa
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