Pseudodesulfovibrio sediminis: PSDVSF_19120
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Entry
PSDVSF_19120 CDS
T08380
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_19120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_19120
Transporters [BR:
psef02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSDVSF_19120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
BCS88670
LinkDB
All DBs
Position
complement(2003119..2004255)
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AA seq
378 aa
AA seq
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MKRRDFLSKAAIAGLAGGTALLAGCNGEDKPANQGAAPAQVKKTIIWKMVTTWPPKLSIL
QTGAESFAEKVELLSDGQMKIQVYAANELVPGLGVFDAVSSGTAECGSGSAYYWAGMDAA
CQWFSAVPFGLSAQGLNAWFYSGGGLDLWDEVYGQFNLIGRPMGNTGVQMGGWFNKEIND
IKDFEGLKIRIPGLGGKVIAKAGGIVVLLAGGEIFTSLERGIIDATEWVGPLHDLRMGFY
QTAKYYYYPGWHEPGTCLDAMFNKDKFMALPKHLQAILKVAAAETNQESLCEFEAHNGAA
LEELVTKHNVQLKRFPEKVLADLRVMAREVIAEEAAKSSLATRVAASFDKFQKQWGAWAD
VSSRSYFDIIAERYVALK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacgtgattttctgagtaaagctgccattgccggtcttgccggtggcactgcc
ctgctcgctggctgcaatggcgaggacaaacccgccaatcagggagccgccccggctcag
gtcaaaaaaacaatcatttggaaaatggtcacaacctggccacccaagttgtccatcctg
caaaccggcgcagagtcctttgccgaaaaggtcgagttgctttctgacggccagatgaag
attcaggtctacgcggccaatgagttggtccctggcctgggcgtatttgacgctgtttct
tccggtacggcagagtgcggttccggctcagcctattattgggctggcatggatgccgcg
tgccagtggttttcggcagtgcctttcggactgtctgcccagggccttaatgcctggttt
tactccggcggtggccttgacctatgggacgaagtgtatggccagttcaacctgattggt
cgccccatgggcaacaccggtgtccagatgggtggctggttcaacaaggaaatcaacgac
atcaaggacttcgaaggtctcaagatacgtatccccggtctgggcggcaaagtgatcgcc
aaggctggcggtattgttgtcctgcttgccggcggtgagatttttacttcgctggaacgc
ggcatcatcgacgcaacagaatgggtcgggccgctccatgacctgcgcatgggcttctac
cagactgcgaaatactactactatccaggatggcatgagccgggaacctgtctggacgcc
atgttcaacaaagacaagttcatggccctgcccaagcatctccaggccatcctcaaggtc
gccgctgccgagaccaaccaggaatccctgtgtgagttcgaggcccataacggtgcggct
ctggaagaactggtcaccaagcacaatgtgcagctcaagcgtttcccggaaaaggttctg
gctgatctgcgcgtcatggcccgcgaggtcattgccgaagaagccgccaagtcttcgctg
gcaaccagggtcgctgcctcctttgacaagttccagaaacagtggggcgcatgggcagat
gtctcatcccgctcctacttcgatatcatagccgagcgctatgtcgctttgaagtag
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