Pseudodesulfovibrio sediminis: PSDVSF_22800
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Entry
PSDVSF_22800 CDS
T08380
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psef03032
]
PSDVSF_22800 (gyrA)
03400 DNA repair and recombination proteins [BR:
psef03400
]
PSDVSF_22800 (gyrA)
Enzymes [BR:
psef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSDVSF_22800 (gyrA)
DNA replication proteins [BR:
psef03032
]
Prokaryotic type
DNA Topoisomerases
PSDVSF_22800 (gyrA)
DNA repair and recombination proteins [BR:
psef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSDVSF_22800 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ArsA_ATPase
BLI1
Motif
Other DBs
NCBI-ProteinID:
BCS89038
UniProt:
A0ABN6EW13
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Position
2383939..2386383
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AA seq
814 aa
AA seq
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MSDTITIESELKKSYLEYSLSVIIGRAIPDVRDGLKPVHRRILFAMHDLGNYHNRAYKKS
ARVVGDVIGKYHPHGDSAVYDALVRMAQDFSMRDMLVDGQGNFGSIDGDAAAAMRYTEVR
MARLCSEFLGDIEKNTVDFRPNYDNTMQEPSVLPTKVPNLLLNGTTGIAVGMATNIPPHN
LGELIDGSIYLLDNKDCTVESLMQWIKGPDFPTGGTVFGGQGLIDAYTTGRGSIKIRGVV
EVEEAKKGRKECIVIKEIPFALNKSSLVEKIAALVHEKKIEGISDLRDESDRNGIRIAID
LKRGAIADIIINSLYKFTQLETSFGINMMAVVGKRPMLLNLKDVLRHFLDHRREVIIRRT
KFDLDKCERRVHILEGLRIALDNIDEVVKLIRASASPDAARTALMDRFELSEIQAKAILD
MRLQKLTGLEHDKLLEELAELMKKIEYFKSILENDEVLRGVIRDELREIKENYATPRKSE
LLSVDLDSIDIEDLIPDEETVITLSRRGYIKRTPLSNYTAQRRGGKGIAGVQTGDGDFIH
TFMLTTNHQHLVLFTNLGKMFKIKVHQVPEGSRYAKGGHVNNLLPLEKDEHIATALSLRE
FQDDRFFLFVTKKGMIKRSSIGLYGNCRTTGIRAVNLKDNDELMDVREIDPNVDCILASR
EGSAIRFNINDARPMGRTTAGVKGMALRPNDEVVACVVTGDEERDQLLTVSEGGFGKRTT
IDQYRVQTRGGKGILNMRLTNKTGKVISARMVNENDDVILLTTQNKVIRMSVSEVSQTRG
RATQGVRLVRMDADNKVAGFDLVMDDDETLNETE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacaatcactatcgaaagtgaactcaagaaaagttatcttgagtactccctc
tcagtcattatcgggcgtgcgatcccggatgtgcgcgacgggctgaaaccggtccacagg
cgcatcctgttcgccatgcatgacctgggcaactaccacaaccgtgcctacaagaaatcc
gcccgtgtggtcggtgacgtcatcggtaaatatcacccgcatggtgattctgccgtgtat
gacgcattggtccgaatggcgcaggatttctccatgcgcgacatgttggtggatggtcag
ggtaacttcggttccatcgacggcgatgccgcggcggccatgaggtataccgaagtccgc
atggccaggttgtgctccgaattccttggtgacatcgaaaagaacaccgttgatttccgg
cccaactatgacaacaccatgcaggaaccctcggtgctgcccacaaaggtgcccaacctg
ctcctcaacggaacaacgggtatcgcggtcggtatggccaccaatattccgccgcacaac
ctgggtgagctgatcgacggttccatttacctgctggataacaaggactgcacggtcgaa
tcactcatgcagtggatcaagggaccggatttccccacagggggcacggtctttggcggt
caggggcttatcgatgcctacacgaccggtcgcgggtccatcaagattcgcggtgtggtc
gaggtcgaagaagccaaaaagggcaggaaagagtgcatcgtcatcaaggaaattcccttt
gcactgaacaagtcctcgctggttgaaaagattgcggcactggttcacgaaaagaagatc
gaaggcatctccgacctgcgtgacgaatccgatcgaaacggtatccgtatcgccattgat
ctgaaacgaggcgccattgccgacatcatcatcaactccctgtacaaattcacgcagctt
gaaacgagtttcggcatcaacatgatggcagtcgtgggcaaacgtcccatgctgttgaat
ctcaaagatgtgctgcggcacttcctggatcatcgccgcgaggtgattatccgtcgcacc
aagttcgatctcgataagtgtgaacgccgtgtccatattctggaaggcttgcgcatcgcg
ctcgacaacatcgacgaagtggtcaagctcatccgcgcatccgcatctcccgatgcagcg
cgtacagccctcatggaccgtttcgaactcagcgagattcaggccaaggccattcttgat
atgcgtttgcagaagctcaccggtttggagcacgacaagctgctcgaagaattggccgag
ctcatgaagaagatcgaatacttcaagtccatccttgaaaatgacgaagtcctcaggggc
gtcattcgtgatgaactcagggagatcaaggaaaattacgccaccccgcgtaaatccgag
ctgctcagcgtagacctggattccattgatatcgaagacctcattcctgatgaggaaaca
gtcattacgctgtccaggcgcgggtatatcaagcgcactccgctttccaactacacggcc
cagcgtcgtggcggaaagggcatagccggtgtgcagacaggcgacggcgacttcatccat
accttcatgctgaccaccaaccatcagcatctggtgctgttcaccaatctgggcaagatg
ttcaagatcaaggtgcatcaggtgccggaaggcagccggtatgccaagggcggacatgtc
aacaacctgttgcccctggaaaaggacgaacatatcgccaccgcgctgtcactgcgcgag
ttccaggacgaccggttcttcctgttcgtgaccaagaagggcatgatcaagcgttcttcc
atcggactctatggcaactgccggaccaccggtattcgcgccgtgaacctgaaggacaac
gatgaactcatggatgtgcgcgagatcgatccgaatgtggattgcatcctcgccagccgt
gaaggatcagccattcgtttcaatatcaacgatgcccgacccatgggacggaccacagca
ggcgtcaagggcatggccctcagacccaatgacgaagtggttgcctgtgtggtcaccgga
gatgaagaacgcgatcagttgctgaccgtatccgaaggcggattcggcaaacggaccacc
attgaccagtatcgtgtccagacacgcggtggtaagggtattctgaacatgcgtttgacc
aataagaccggtaaggttatcagcgcacgcatggtcaacgagaatgacgatgtcatcctg
ctgaccacacagaacaaagtcatccgcatgtccgtgtccgaagtcagccagaccagaggc
cgcgccacgcagggtgtccgactggtccgcatggacgccgacaacaaagtagcagggttt
gatctcgtcatggacgatgacgaaaccctcaatgaaacagaataa
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