Pseudodesulfovibrio sediminis: PSDVSF_22920
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Entry
PSDVSF_22920 CDS
T08380
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00230
Purine metabolism
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
Module
psef_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PSDVSF_22920 (purD)
Enzymes [BR:
psef01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
PSDVSF_22920 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_2
LAL_C2
ATP-grasp_5
RimK
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
DUF2007
Motif
Other DBs
NCBI-ProteinID:
BCS89050
UniProt:
A0ABM7P7Z8
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Position
2396452..2397729
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AA seq
425 aa
AA seq
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MKILVVGSGGREHALCWKLSQNPKVTQIMCAPGNGGTAQVGENIAVKDDDIPALVKLAKE
REVDLVVVGPELPLVLGLENALRQEGIPCFGPNAFAANLEGSKAFSKNVMADAGVPTAPF
RVFDEFDEAVAFIKEKGAPIVVKADGLAAGKGVVVATSEEEAIEAVEEMMVKKAFGSAGD
RVVIEEALKGEEASFLAFCDGTNFAMLPSSQDHKAAYEGDTGPNTGGMGAYSPAPILPKE
KYAETAELCIKPILRHLAAKDEPFKGVLYAGLMYTDNGPSVLEYNVRFGDPECQPLLMRL
ETDLLEIMFACIDGKLDEIDVVSTPQTACGVVIAAEGYPGSYSKGMEVTGLDAADAMEGV
KVFQAGTKVDGDKIVTSGGRVLCVTALGDDLAAAQKKAYEAVDKVHFDKSFYRKDIADKG
LKRIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggttgttggttctggtggtcgtgagcacgcattgtgctggaagctttct
cagaacccgaaagtaacgcaaatcatgtgtgcgccgggtaacggcggcacagcccaggtg
ggcgaaaatatagcggtcaaggacgatgatattccggctctggtcaaattggccaaagag
cgcgaagtcgatctggttgtggtcggcccggagttgccgttggtgcttggtctggagaac
gccctgcgccaggaaggcattccctgtttcggccccaatgcgtttgcggccaatctggaa
gggtccaaggccttttccaagaacgtcatggcggacgctggtgtacccaccgcaccgttc
cgcgtgtttgacgaatttgatgaagccgtggcttttatcaaggaaaagggcgctcccata
gtggtcaaggccgatggtctggctgcgggcaagggcgttgtcgtggccacctccgaagaa
gaagccattgaggccgtggaagagatgatggtcaaaaaggcttttggctctgcgggtgac
cgcgtggtcatcgaagaggcgctcaagggtgaggaagcctccttcctcgcattttgcgac
ggcaccaactttgccatgcttccttccagtcaggaccacaaggccgcctatgagggcgat
accggccccaacaccggcggcatgggcgcctattctccggccccgatcctgcccaaggaa
aagtatgccgagaccgccgagttgtgtatcaagcccatcctgcgccacctggctgccaag
gatgagccgttcaagggcgtgctgtatgcaggcctgatgtacaccgataacgggccgagc
gtgcttgaatacaacgtccgtttcggcgaccccgaatgccagccgttgctaatgcggttg
gaaaccgatctgctcgaaatcatgtttgcctgcattgatggcaagctcgacgaaattgat
gtggtctccactccgcagaccgcctgtggtgtggtcattgcggctgaaggataccccggc
tcctattccaagggcatggaagtcaccggactcgacgcagccgatgccatggaaggggtc
aaggtctttcaggccggaaccaaagtggacggcgacaagattgtcacttccggtggccgc
gtgctctgtgtcaccgcactgggcgatgatctggccgcggcacagaaaaaggcctacgag
gccgtggacaaggttcatttcgacaagagcttctaccgcaaggatattgcggacaaaggt
ctgaaaagaataaaataa
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