KEGG   Pseudodesulfovibrio sediminis: PSDVSF_24090
Entry
PSDVSF_24090      CDS       T08380                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psef00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSDVSF_24090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psef02022]
    PSDVSF_24090
Two-component system [BR:psef02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   PSDVSF_24090
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_2 Mg_chelatase AAA_3 AAA_16 MCM bpMoxR ATPase HTH_29 ENTR1 Phage_CP76
Other DBs
NCBI-ProteinID: BCS89167
UniProt: A0ABM8HZD7
LinkDB
Position
complement(2522965..2524368)
AA seq 467 aa
MSGKILIIDDEESIRFSLRGILEDEGLDVAEAESGEQGLELIGTDIPDMIFLDIWLPGMD
GLEVLENVTRDYEGLPVIMISGHGTIETAVQALKKGAFDFIEKPLSLEKVVVSSRNALEF
SRLRQENQALKTRITSEQPVSLTGQSAAIQELKDVIARVAPTDAWVLITGENGTGKEIVA
RSIHHLSGRADKPLVAVNCAAIPEELIESELFGHEKGAFTGAEKAQEGKFELADGGILFL
DEIGDMSLKTQAKILRILQEQAFEHVGGRKTITVDVRVIAATNKDLTEEIKAGNFREDLY
YRLKVFPLELPPLRTRTDDILLLITDFMNSLVKQHGFKPISFGQDAIRALTAYPWPGNVR
ELKNFVERMFIMYAGEAVSADRLPPEFKKAIEEQPAVVAPHTPETSMDDLIAGGPDDLKQ
ARADFEARFLEAKLKEFEGNISQLAKAIGLERSSLYRKLKTYNIQTD
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagcggaaaaatcctgatcatagatgacgaagaaagtatccgcttttccctgcgcggg
attcttgaagacgaagggcttgacgtggccgaagccgagtccggcgagcaggggcttgag
ctgatcggtacggacatcccggacatgattttcctcgacatctggctgcccggcatggac
ggtctcgaagtcctcgaaaacgtgacgcgcgattacgaagggctacctgtcatcatgatt
tccggacacggcaccattgaaaccgcggtccaggcgctcaagaaaggcgcctttgacttc
atcgaaaaaccgctctcgctggaaaaggtcgtggtctcctcgcgcaacgctctggagttc
tcccgcctgcgtcaggagaaccaggccctcaagacacgcatcacctcggagcagcctgtc
agcctgaccgggcagtccgcagccattcaggaactcaaggatgtcattgcccgcgtggcg
cccaccgacgcgtgggtgctcatcaccggcgagaacggcacgggcaaggagatcgtggcc
cgctccattcatcacctctccggccgggcagacaagccgctggtggccgtgaactgcgca
gccattcccgaggagctcatcgaatccgaactcttcggccatgaaaagggcgcgttcacc
ggtgcggaaaaagcgcaggaaggcaaattcgaactggcagacggcggcatcctcttcctc
gacgagatcggcgacatgagcctgaagacgcaggccaagattctccgtattttgcaggaa
caggcctttgaacatgtgggcggacgcaagaccatcaccgtggacgtgcgcgtgatcgcg
gccaccaacaaggacctgaccgaagagatcaaggcgggcaatttccgcgaagacctctat
tatagactcaaggtctttccgctggaactgcctccactcagaacccggactgacgacatc
ctcctgctcatcaccgatttcatgaactcgctggtcaaacagcacggcttcaagcccatc
tcctttggacaggacgccatcagggcgctcaccgcctacccctggcccggcaatgtgcgc
gagctgaaaaatttcgttgagcgcatgttcatcatgtacgccggcgaggctgtgtccgcc
gaccggctgccgcccgaattcaagaaagccatcgaggaacaacccgcggtcgttgctcca
cacacgcccgagacctccatggatgatctcatcgcaggcggcccggacgatctcaagcag
gcccgcgccgatttcgaagcccggttcctcgaagccaagctcaaggaattcgaaggcaat
atctcgcagcttgccaaggccatcggtctggaacgtagctccctctaccgcaaactcaag
acgtataacatccagacggattag

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