Pseudodesulfovibrio sediminis: PSDVSF_24680
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Entry
PSDVSF_24680 CDS
T08380
Name
(GenBank) hypothetical protein
Organism
psef
Pseudodesulfovibrio sediminis
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS
PAS_4
PAS_9
HATPase_c
Response_reg
PAS_3
HisKA
PAS_8
Diguanyl_cycl_sensor
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
BCS89226
UniProt:
A0ABM7P8C3
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Position
2588388..2591414
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AA seq
1008 aa
AA seq
DB search
MNSECFQGLYTAIGDGLVYTDTVGRILKVNPAFCSIVGFSESEMRGRTILDFTSQSDREE
EKQRILACMNSDCRSGEYEKRLIHREGRQIPLKVQFWVDRDEKGVALGMWSVVRNMTSQR
AAEEQATRSRLQYLFMTDNAEDVIWAVDQTMMYTYISPSVERLRGFTPDEVIGSSFKESM
TDASFRVVSDALARGFAARARGAAEIVDRFEIELRCKDGGTIWVESVAKAMLDESGVWIG
IVGSTRDISDRKRMEEKLKESQQFMRALLDAPVEAVGLFSTEGTTLVANMKMAQFLGTSM
EAMSGQSVYPFFQPQLQEIIQKAFDDAVESGESIEVESVHSGRIVAATVYPLVEEGVVSS
LAVFAKDVTDVRFAEETRKKTQEKYKLIVETANEGILGMDADQRITYANAIFADFIGCDV
MEIIGQPLTQYIAIDEHTKNENRLALRKLGERARYDCKFRRKDGVEVWGLVSATPLAAED
GSVLGAFAMVADITDVKQAHQRLITILDGIDADIFVSDLETNEILFMNAHLDARFGPYQD
GLTCHALFYNQNVRCQDCPKPRLLDKDGLPSETVVSEKYNPKLNIWSLNHDRTIEWLQGQ
RVHMHMGADITELKTIAEELQVAIGKTKAASLAKNEFLANMSHEIRTPLNGLLGMLQLLQ
LSPLDDDQSKSLNTALGSGRNLLQILNDILDISKVESGKLELEEQYFELGDVLDSVVSIF
KPTAEKRGVNVSWAIDESLPRQFMADKGRLRQILFNLVGNATKFTEEGAICVEAYPIQST
LDHEAPHIFFRVKDTGIGIPEEKIDNVFDPFTQADGSITRKYQGTGLGLGIVHRLVLLMG
GTISVSSEVGKGTVIAFTIKAKLDLRNQKMHVRELVPKERKAAYSILVAEDERVNQLVVQ
RLLEKNGHSVRCVFSGEEAVEVLQTETFDLFLTDIQMPGLDGVETTRIIRQDLGLTFPIV
ALTAHAMKGDQERYIGAGMDGYVAKPFELNELRAEIERVMTRVVPKSK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaatgctttcaaggtctctacacggctatcggcgatggccttgtctatacg
gataccgtgggaaggattctgaaggtcaaccctgccttttgctccatagtcggtttctcc
gaaagcgaaatgcgaggacggaccatactcgacttcacatcgcagtctgaccgggaagag
gagaagcagcgtattctggcctgcatgaacagcgactgccgatccggcgagtacgagaaa
cggcttattcaccgggagggccgccagatcccgctcaaggtccagttctgggtggaccgg
gacgagaagggtgttgccctgggcatgtggagcgttgtcaggaacatgaccagccagcgg
gctgccgaagaacaggcgacccgctccagattgcagtatctgttcatgaccgacaatgcc
gaggacgttatctgggctgtcgatcagacaatgatgtatacgtacatcagcccttcggtc
gagcgtcttcgtggtttcactcccgatgaagttattggctcgtctttcaaggaatcgatg
accgatgcgtccttccgcgtcgtcagtgacgcccttgcccgggggtttgccgcacgagcg
cgcggggcggcagagattgttgatcgttttgaaatcgaactcaggtgcaaggatggcggc
accatctgggtggagagcgtggcaaaagccatgctggacgagtccggcgtatggataggc
attgtcgggtccacccgtgatatctccgaccgcaagcggatggaggagaagctcaaggag
agccagcagttcatgcgcgctctgctcgatgctccggtcgaggcggtggggctgttcagc
acggagggaacgacgcttgtcgccaatatgaagatggcgcagtttctggggacgtcgatg
gaagccatgtcaggacagtctgtctatccgttttttcagccacagttacaggagatcatc
cagaaggcatttgatgacgccgtggagtccggggagtctatcgaggtcgagagtgtgcat
tccggcaggattgttgccgccactgtatatcccttggtcgaggagggagtcgtgtcttcc
ctggcagtgtttgccaaggatgtcactgatgtccgctttgccgaagagacccgaaagaag
acgcaggaaaaatacaagctcatcgtcgagaccgccaatgaggggattctcggaatggat
gccgatcagcgcatcacctatgccaacgccatttttgcggattttatcgggtgcgatgtc
atggagatcatcggacagcctcttacccaatatatcgcgatagatgagcacacgaagaac
gagaatcgtctggccctgcgcaagctgggcgagcgcgcgcggtatgattgcaagtttcgg
cgcaaggatggcgttgaggtctgggggctggtctcggccacccctctggcggccgaggat
gggagcgttctgggggcattcgccatggtcgccgacatcacggatgtgaaacaggcgcat
caacggctgattaccattcttgacggcattgatgcggatatcttcgtgtctgatctggaa
accaatgaaattctgttcatgaacgcccatctggatgcccgcttcggcccataccaggat
ggattgacctgtcatgcacttttttacaaccagaatgtccggtgtcaggactgtcccaag
cccagactgttggacaaggacggcctcccttcggaaaccgtagtctcggaaaagtacaac
cccaagctgaatatatggtcgctcaaccatgatcggacgatcgagtggttgcaggggcaa
cgcgtgcacatgcatatgggggctgacatcacggagctcaagaccatagccgaagaactt
caggtcgccattggcaagaccaaggccgccagtctggccaagaatgagttcctggccaac
atgagccacgagatacgaacgccgcttaacgggctgcttggcatgcttcagttgctgcag
ctctctccgcttgatgatgaccagtccaagtcgttgaatacagcacttggttccgggcgg
aatctgctccagattttgaatgacatattggatatttccaaggtggagtccggcaagctg
gagctggaagaacaatatttcgaattgggagacgtactggattccgttgtctccattttc
aagcccactgcagaaaagagaggggtaaacgtgagctgggccattgatgaatccctgcct
cgccagttcatggcggacaagggacggctcagacagatactgttcaacctggtgggcaat
gcgaccaaattcaccgaagaaggggccatttgcgttgaagcctaccccattcagtctacc
ctggaccatgaggcccctcatatctttttcagggttaaggatacgggcatcggcattccc
gaggaaaagattgataacgtgtttgatccgtttacccaggcggatgggtccatcacgcgc
aagtatcagggaaccggtctcggcctcgggatagtgcacaggctggtcctgcttatgggg
ggcactatctccgtcagttccgaggtgggcaaagggactgtcatagcgttcaccatcaag
gccaagctggatttgcggaaccagaaaatgcatgtccgggagctcgttccaaaggaacgc
aaggcggcatattccattcttgttgccgaggacgaacgggtcaaccagctcgttgtccaa
cggctgttggaaaagaacggacattcggttcgttgtgtgtttagcggagaagaggccgtg
gaagtgctccaaacggaaacgtttgatcttttccttaccgacattcagatgcccggtctt
gatggtgtcgagaccacccggatcattcgtcaggatctcggattgacgtttcccattgtg
gcgcttacggcccacgccatgaaaggcgatcaggagcggtacatcggtgcgggaatggac
ggatatgtggccaagccgtttgaactcaatgaattgcgggccgagatcgagcgggtcatg
acccgggtcgttcccaagtcgaaataa
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