KEGG   Pseudodesulfovibrio sediminis: PSDVSF_25670
Entry
PSDVSF_25670      CDS       T08380                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef00300  Lysine biosynthesis
psef00470  D-Amino acid metabolism
psef01100  Metabolic pathways
psef01110  Biosynthesis of secondary metabolites
psef01120  Microbial metabolism in diverse environments
psef01230  Biosynthesis of amino acids
Module
psef_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psef00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSDVSF_25670 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSDVSF_25670 (dapF)
Enzymes [BR:psef01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PSDVSF_25670 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase
Other DBs
NCBI-ProteinID: BCS89325
UniProt: A0ABM7P8K1
LinkDB
Position
complement(2693326..2694177)
AA seq 283 aa
MTIFGTSVSFYKMQGCGNDFVIIDNRELGVPESSMKDWAIALCARAFGIYADGLFFLENS
DDPDQDYRWHFYNSDGSRAEMCGNASRCAGKLAHAIGLAPAEHVFGTDAGSIKAQVLLDG
PDAGRVKVQLTPPQNTETNIVLDIDGEPLTVHYSDTGVPHVVVFVDDIKTLDIMDIGPKI
RYHEHFAPAGTNVNFAQVLDRNTMLLRTYERGVEGETFACGTGASATQLLANALGLTDEY
ANLTTTGNEVLTVFLEEGNIFLQGAAELTFKGEFYLEALGLSV
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaccatattcggcacatccgtttcattctacaagatgcagggttgcggcaacgacttc
gtcatcatcgacaaccgcgaactgggcgtccccgagtcctccatgaaggactgggccatc
gccctgtgcgcccgcgccttcggcatctatgcagacggcctgttttttctggaaaactcc
gatgatcccgatcaggattaccgctggcatttctacaactccgacggctcccgcgccgag
atgtgcggcaacgcctctcggtgtgccggaaagctcgcccacgccatcgggctggctcct
gccgaacatgtcttcggcacagatgcagggtccatcaaggcccaggtgctgctcgacggc
ccggatgccggtcgcgtcaaggttcagcttaccccgccccagaacacggaaaccaacatc
gtgctggatatcgacggcgagccgctgaccgttcactactccgacaccggcgtgccccat
gttgtcgtgttcgtcgacgatatcaagacgcttgatatcatggatatcggtcccaaaatc
cgctaccacgagcacttcgcccctgccgggaccaacgtcaactttgcccaggttctcgac
aggaacaccatgctgctgcgcacctacgaacgcggggtggagggtgagacctttgcctgc
ggcaccggcgcctcggctacccagctgctagccaacgcgctcggtttgaccgacgagtat
gccaacctgaccaccaccggcaatgaagtactgaccgtctttctggaagaagggaacatc
tttctccagggagcagccgaactgacattcaagggagagttctatctcgaagctcttggg
ctgagcgtatag

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