Pseudodesulfovibrio sediminis: PSDVSF_26920
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Entry
PSDVSF_26920 CDS
T08380
Symbol
rlmH
Name
(GenBank) ribosomal RNA large subunit methyltransferase H
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
psef
Pseudodesulfovibrio sediminis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psef03009
]
PSDVSF_26920 (rlmH)
Enzymes [BR:
psef01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
PSDVSF_26920 (rlmH)
Ribosome biogenesis [BR:
psef03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSDVSF_26920 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
BCS89450
LinkDB
All DBs
Position
2848495..2848965
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AA seq
156 aa
AA seq
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MSKIGFIWVGKLKEPFSKDGCAHYWKKLSRFFKLDEAMVKDAPGKLPALEKSKVEGEGIL
SKVKKGDVLIILDEFGDRLTSKKLAKLLQKWTDAPNQRPVFVIGGPFGLSDDVKQAARHS
IRLSDMTLPHELARLVLLEQLYRAGTIHKNMPYHHE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatcggtttcatctgggtcggcaagctcaaagagccattttccaaggatggc
tgcgcccattactggaagaaactgtcccgttttttcaagctggacgaggccatggtcaag
gacgcgcccggcaagttgcccgccttggagaagagcaaggtagagggcgaagggattctt
tccaaggtcaaaaaaggggacgtgctcatcattcttgatgaattcggtgaccgtctgacc
tccaaaaagttagcaaaactgcttcagaaatggacggatgcgcccaatcagcggcctgtt
tttgtcatcggcggtccctttggtttgtctgatgacgtcaagcaggcggcccgtcattcc
attcgattgagtgacatgaccctgccgcacgaactggcccgtctggtcttgcttgaacag
ctgtaccgagcaggaaccatccataaaaacatgccttatcatcacgaatag
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