Pseudodesulfovibrio sediminis: PSDVSF_27430
Help
Entry
PSDVSF_27430 CDS
T08380
Symbol
cobB-1
Name
(GenBank) cobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00860
Porphyrin metabolism
psef01100
Metabolic pathways
psef01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSDVSF_27430 (cobB-1)
Enzymes [BR:
psef01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
PSDVSF_27430 (cobB-1)
6.3.5.11 cobyrinate a,c-diamide synthase
PSDVSF_27430 (cobB-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
AAA_31
SNO
MipZ
CBP_BcsQ
AAA_30
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
BCS89501
UniProt:
A0ABM7P7Q6
LinkDB
All DBs
Position
2910265..2911665
Genome browser
AA seq
466 aa
AA seq
DB search
MGSIIVHTFLSRIVLAGLSGGTGKTIVSLALARAFSRAGKKVAPFKKGPDYIDAKWLGLA
AKSPCSNLDPFFHSSEAIRSLFFHKSQGFDVSLIEGNRGLFDGKDEQGSCSTAELARVLD
APVILAIDCTKMTRTVAAIVQGCVHFEKGVNLAGVILNRTAGERHRSILKKSIETHTDVP
VLGMLPKIGENPIPERHMGLMSDQEYTGSGHDALDALADMAEEWLDMDAILKVAESASDF
GPVTQPIFSGQPAAKSVRIGYVHDAALWFYYPENLEALEHAGAEMVRVSLLDDTPWPELD
GLYLGGGFPEVFCSEIAANSSILKHIYALAESGLPIYAECGGFMVLCDSLQIEGASHKMA
GVFPLSTSFCPRPQGLGYTEAEVIAENPFYPVGSTIQGHEFHYSMCVSDNAPDLEFGLRM
RRGKGSAIGHDGFLYKNTMAGYNHIHALAVPGWAERFVAAARKHQS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcatagtgcacacatttctttctcgtatagttcttgccgggctttccggt
ggcacaggaaagactattgtctccctggccctggcccgtgccttttccagggcgggtaaa
aaagtcgctccctttaaaaaggggccggactatatcgacgccaaatggcttggtcttgcc
gccaaaagtccctgttcgaatctcgaccctttctttcattcctcagaagcgattcgctca
cttttctttcataaatcgcaagggtttgacgtcagcctcattgaaggcaaccgggggttg
ttcgacggcaaggacgaacagggctcctgctccacggcagagctggcccgcgtgctcgat
gctccggtgatactggctatcgactgcaccaagatgacccgaaccgtggcggccattgtt
caaggctgcgttcactttgaaaaaggggtgaacctggccggagtgatcctgaacagaacc
gctggggaacgccatcgttccattctcaagaagtccattgaaacgcatacggatgtgccg
gtgctcggcatgctgcccaaaatcggagagaatcccattccggaacgtcacatggggctc
atgtccgatcaggagtataccgggagcggccatgacgcacttgacgcactggccgatatg
gcagaagaatggctggacatggacgcaatcttgaaagtggccgagtccgcctcggatttc
ggtccggttacacaaccgatcttttccggtcagcctgcagcgaagtccgtacgcataggc
tatgtgcacgacgccgcgctctggttctattatcccgaaaatctcgaggctttggagcac
gccggagcagagatggttcgggtcagcctgcttgacgacacgccgtggcccgagctggac
ggtctgtatctcggtggtgggttccccgaggttttctgttcggaaattgcggccaattcg
tctattctgaaacatatctacgctttggcagagagcggattgccgatctacgccgagtgc
ggaggcttcatggtgctgtgcgattctctgcagattgagggtgcttcccacaaaatggca
ggggttttccccttgtccacctcattctgtcctcggcctcaagggcttggctataccgag
gctgaagtcattgccgagaatccgttctatccggtgggttcaaccattcagggacatgag
tttcattattcaatgtgtgtctccgacaatgcgcccgacctggaattcggtctgcgaatg
cgccgtggaaaggggagtgccatcggtcacgacgggttcctctataaaaacaccatggca
gggtacaatcacattcatgcgttggctgtgcctggctgggccgagcgcttcgtggccgct
gcccgcaagcatcaatcctaa
DBGET
integrated database retrieval system
