Pseudodesulfovibrio sediminis: PSDVSF_27650
Help
Entry
PSDVSF_27650 CDS
T08380
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSDVSF_27650 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psef03019
]
PSDVSF_27650 (groL_1)
03110 Chaperones and folding catalysts [BR:
psef03110
]
PSDVSF_27650 (groL_1)
03029 Mitochondrial biogenesis [BR:
psef03029
]
PSDVSF_27650 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psef04147
]
PSDVSF_27650 (groL_1)
Enzymes [BR:
psef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSDVSF_27650 (groL_1)
Messenger RNA biogenesis [BR:
psef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSDVSF_27650 (groL_1)
Chaperones and folding catalysts [BR:
psef03110
]
Heat shock proteins
HSP60 / Chaperonin
PSDVSF_27650 (groL_1)
Mitochondrial biogenesis [BR:
psef03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSDVSF_27650 (groL_1)
Exosome [BR:
psef04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSDVSF_27650 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
PSDVSF_27650 (groL_1)
Exosomal proteins of breast cancer cells
PSDVSF_27650 (groL_1)
Exosomal proteins of colorectal cancer cells
PSDVSF_27650 (groL_1)
Exosomal proteins of bladder cancer cells
PSDVSF_27650 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCS89523
LinkDB
All DBs
Position
complement(2930091..2931677)
Genome browser
AA seq
528 aa
AA seq
DB search
MAKAIDYKAVAREGMQNGVNILANAVRVTLGPKGRNVMLEKAWGAPQVTKDGVTVAEKID
LEDKLENMGAQMVKEVASKTNEIAGDGTTTATVLAQAIFNEGVKLLAAGRNPMSLKRGID
KAVEAVVAELDAMAKPVKKTSEIAQVGAISANNDTTIGDILAQAVDKVGDNGVITVEESQ
GLTTELDVVEGMQWDQGYLSPYFVNDADKQAAVYENPFILLSEGKISSIKPLVPILEAVA
KAERPLLIIAETVENDALAGLTINAMRGSLKACAVKAPGFGDRRKDMIRDIAIMTGATPV
SEDTATTLESIQPGDFGTAKKVVVDKNNTLIVDGAGDKKAIAQRCEEISNMAQNSSSDYD
REKLQERLAKMVGGVAVIKVGAPTEIEMKERKDRVDDALNATRAAVDEGIIPGGGTALVR
AGKVLAKLKVADDTEQAGVDIIAKAIEEPLKQIANNCGLEGTVIVAKVKEQKGNNGFNAA
TGEFTNLVKEGVIDPKKVTRIALQNASSVSSMLLTTECAISEFVAEED
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaattgattacaaagcggtcgcccgtgagggcatgcagaacggcgtcaac
atcctggccaatgctgtcagggtcacccttggtcccaagggccgcaacgtcatgctggaa
aaagcatggggcgctcctcaggtcaccaaggacggcgtgaccgtagccgagaagatcgac
ctggaagacaagctcgaaaacatgggcgctcagatggtcaaggaagtcgcttccaaaacc
aatgaaatcgccggtgacggcaccaccaccgccacggttctggctcaggccattttcaac
gaaggcgtcaaactgctggccgccggtcgcaaccccatgtccctcaaacgcggcatcgac
aaagccgttgaagccgtggttgccgaactcgacgccatggccaagccggtcaagaagacc
tccgaaatcgcccaggtcggtgccatctccgccaacaacgacaccaccatcggcgacatc
ctcgcccaggctgtggacaaggtcggcgacaacggcgtcatcaccgtggaagagtcccag
ggactgaccaccgagttggacgttgttgaaggcatgcagtgggatcagggctacctctcc
ccctactttgtcaacgatgccgacaaacaggccgctgtatacgagaatcctttcatcctg
ctttccgagggcaaaatctccagcatcaagccgctggttcccattctggaagccgtggcc
aaggctgaacgtcctctgctcatcatcgcagagaccgttgaaaacgacgctctggccggt
ctgaccatcaacgccatgcgcggctccctgaaagcctgcgccgtcaaggcccccggtttc
ggcgaccgccgcaaggacatgatccgcgacatcgccatcatgaccggcgccaccccggtc
tccgaagacaccgccaccaccctggagtccatccagcccggcgacttcggtactgccaaa
aaagtcgtggtcgacaagaacaacaccctcatcgttgacggtgctggcgacaagaaagcc
attgcacagcgttgcgaagaaatctccaacatggcgcagaactcctcctccgactacgac
cgcgaaaagctccaggagcgcctcgccaagatggtcggcggcgttgcagtgatcaaagtg
ggcgcccccaccgagatcgaaatgaaagagcgcaaggatcgcgtcgacgacgcactgaac
gcaacccgcgcagccgttgacgagggcatcatccccggcggcggcaccgctctggtgcgt
gcaggcaaggtcctggccaagctcaaggtcgctgacgacaccgagcaggccggcgtggac
atcatcgccaaggccattgaagagcctctcaagcagatcgccaacaactgcggcctcgaa
ggcaccgtcatcgtcgccaaggtcaaggaacagaaaggcaacaacggcttcaatgccgct
accggcgaattcaccaatctggtgaaggaaggcgtcatcgatcccaagaaggtgacccgc
atcgccctgcagaatgcctcttccgtgtccagcatgctgctgaccaccgaatgcgccatc
tccgaattcgtggcagaagaagactaa
DBGET
integrated database retrieval system
