Pseudodesulfovibrio sediminis: PSDVSF_28800
Help
Entry
PSDVSF_28800 CDS
T08380
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00061
Fatty acid biosynthesis
psef00071
Fatty acid degradation
psef01100
Metabolic pathways
psef01212
Fatty acid metabolism
psef02024
Quorum sensing
psef04146
Peroxisome
Module
psef_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSDVSF_28800
00071 Fatty acid degradation
PSDVSF_28800
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSDVSF_28800
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDVSF_28800
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psef01004
]
PSDVSF_28800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psef04147
]
PSDVSF_28800
Enzymes [BR:
psef01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSDVSF_28800
Lipid biosynthesis proteins [BR:
psef01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSDVSF_28800
Exosome [BR:
psef04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSDVSF_28800
Exosomal proteins of breast cancer cells
PSDVSF_28800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_2
Motif
Other DBs
NCBI-ProteinID:
BCS89638
LinkDB
All DBs
Position
3060546..3062459
Genome browser
AA seq
637 aa
AA seq
DB search
MPKSYKTTLPRLLIKQAEERARKTALREKEWGVWQAVTWQENLKITAEFACGLEKLGLTK
GDIVILIGDNRPEWIWAELAIQALGGIALGLYQDSPAEEIEYIFALSECKLVVAEDQEQV
DKMLSFRDNLPHLKHIIYHDPKGLVAYEADVDGLQDFKAIRRLGREAQSDVVGRYKELAR
KLDPNDACLIATTSGTTGRPKLAMLSHVNLLSMAHNLGQFDPKSARDEFVSFLPLAWMGE
QMMAVASALLFGFCVNFPETPDTASADSREIGPHFIFSPPRVYESIAAKVQGDIMETTPI
KRFLYHLFLPIGYEYVDTVFAGETPSAWLKFKYFIADKGLFRALRDRLGFSRMRSATTGG
AALGPDIFRFFHALGVRLKQIYGQTEIAGISCIHKDGEVDFTSVGAPIPETEVRITEEGE
IISRSPAVFLGYYKNEEATRETVSEDGWLLSGDAGYFDDNGRLVVIDRLKDVMHLNDGTQ
FSPQFLENKIKFSPFLRESVVLGGGRDYVSAILCIDMAIVGHWAETQMVTYTTYQDLAAK
DEVYQLIKDEVAKTNATLPAETQIKRFCLLYKELDPDDGELTRTRKVRRKTINERYGSLI
EALYTDACAMNLETEITYQDGRVREICGAIRIEDMEA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcatataagacaacattgccccgtctgctcatcaagcaggccgaggagcgc
gcccggaagaccgccctgcgtgaaaaggaatggggtgtctggcaggccgttacctggcag
gaaaacctcaagatcacagcggaattcgcctgtgggctggagaagctggggctgaccaag
ggcgacatcgtcattctcatcggcgacaaccgcccggaatggatctgggccgagctcgcc
attcaggctctaggcggcatcgcactggggctgtatcaggactcacctgccgaagaaatc
gaatatatttttgcgctttcagaatgcaaactcgtggttgccgaagaccaggagcaggtg
gacaagatgttgtcgttccgcgacaacctgcctcacctgaagcatatcatctatcatgat
cccaagggcttggtcgcttatgaagcggacgtggacgggctgcaggatttcaaggccatt
cgccgtctgggacgtgaagcccagtccgatgtggtgggccgatacaaggagctggctcgc
aagctcgatcccaatgacgcctgtctcatcgccaccacgtctggcaccacgggacggccc
aagctggccatgctctcccacgtcaacctgctctccatggcccataatctgggtcagttt
gaccccaaatccgccagggacgagttcgtctccttcctgccgctggcatggatgggcgaa
cagatgatggccgtggcgtcagcgctgctgttcggcttctgcgtcaattttccggagacc
ccggacacggcctctgccgactcccgcgagatcgggccgcattttatcttctccccgccg
cgcgtgtatgaatccattgcggcaaaggtgcagggcgacataatggagactacgcccatt
aagcggttcctgtatcacctcttcctgcccatcgggtatgaatatgtggacacggtcttt
gcgggcgaaaccccgtcagcctggctcaagttcaagtatttcatcgcggacaaggggctg
tttcgcgctctgcgcgatcgccttgggttctcgcgcatgcgcagcgccactaccggcggt
gcggcgctcggcccggatatcttccgtttcttccacgcccttggcgtccggttgaagcag
atctacggccagaccgagatcgcgggtatttcctgtattcacaaggatggcgaggtcgac
tttacctcggttggcgcgccgattcccgagaccgaggtcaggatcacggaagagggcgag
atcatctcccgttccccggcggtttttctcggctactacaaaaacgaggaagcgacacgg
gaaacggtctccgaagacggttggctgctgtccggcgacgccgggtattttgacgacaat
ggccgactggtggtcattgatcgcctcaaggacgtcatgcacctcaacgacggcacccag
ttctcgccgcagtttctggaaaacaagatcaagttctccccattcctgcgcgaatccgtg
gtgctcggcggcgggcgcgattatgtgtcagccatcctgtgcatcgacatggccatcgtg
ggccactgggcagagacacagatggtcacctacaccacgtatcaggatctggcggccaag
gatgaggtctatcaactcatcaaggatgaggtcgccaagaccaacgcgaccctgcctgcc
gaaacgcagatcaaacggttctgcctgctgtacaaggaactcgacccggatgacggcgaa
ctgacccgcacgcgcaaggtgcggcgcaagaccatcaacgagcgatacggctcgctcatc
gaggcgctctatacagatgcctgcgccatgaatctggaaaccgaaatcacctaccaggat
ggccgggtgcgagagatatgcggtgctatccgcattgaggacatggaggcctaa
DBGET
integrated database retrieval system
