Pseudodesulfovibrio sediminis: PSDVSF_28830
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Entry
PSDVSF_28830 CDS
T08380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
psef02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_28830
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDVSF_28830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_28830
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PSDVSF_28830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Bmp
Motif
Other DBs
NCBI-ProteinID:
BCS89641
LinkDB
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Position
3064490..3065719
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AA seq
409 aa
AA seq
DB search
MRVGKIITAACIMLLAGLMLFGCGGEEQKPAETKTDSHSEAKDASPILVGGLVDMSGPTS
SVGVPYAAGLKAGVKYVNDNGGIDGRPIEFDLQDTAYNVQTGLSLYKKMVNEKVVCIQGY
GSAVTEALTRSLAKDKIPDLSASYSAHLTDPAKAPYNFFIAADYSTQARAAIKYFRDTWT
ETRAPKIAFIYPDHPYGLAPIKGAKAYAEELGFELVGDANVSLKAIDATTELLPLKDAAP
DFCWIGGTTPSTSVILKSAKNIGMDTVFFTNIWGSDENLYKLAGDDANGAYSNQAAAVYG
DDVPGMKAIMEITNNEPQMTHFTRGFVSILVMAEGLKRAGANGPITGEAVKTALETLRDF
DPMGLAPLISYFPDDHRPNMAVFLYTIKDGKLTFVKEQILERRADWLGH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagggtaggtaaaatcataactgcggcttgcatcatgcttcttgccgggctgatgctc
tttggctgtggaggcgaagagcagaaaccggctgaaaccaaaaccgattcacacagtgaa
gccaaggacgcgtccccgattctggtgggcggtcttgttgacatgtccggtcccacttcg
tccgtgggcgtcccctacgccgcgggcctcaaggccggcgtcaaatacgtcaacgacaac
ggcggcattgacggtcgccccatcgaatttgatctgcaggacactgcgtacaatgtccag
acaggtttgtccctgtacaagaaaatggtcaacgagaaggttgtctgcattcagggatac
ggctcggccgtgaccgaagcgctgacccgcagtctggccaaggacaagattcccgatctg
tccgcatcctactcggcccacctgaccgatccggccaaggctccgtacaacttcttcatt
gccgccgactactccacgcaggcccgtgctgccatcaagtacttccgcgacacctggacg
gaaacacgcgctcccaagatcgcgttcatctatcctgaccacccctatggtctggctccc
atcaagggcgccaaggcctatgccgaagaactcggcttcgagctggtgggcgacgccaac
gtctccctgaaggccatcgacgccaccaccgagctgcttcccctcaaggatgccgccccg
gacttctgctggatcggcggaaccacaccgtccacatccgttatcctgaaatccgccaag
aacatcggcatggacaccgtctttttcaccaatatctggggatcggacgagaacctgtac
aagctggccggtgacgatgccaacggggcctactccaaccaggccgccgctgtttacgga
gacgacgtgcccggcatgaaggcgatcatggagatcaccaacaacgaaccgcagatgacg
cacttcacccgtggatttgtgtccattctggtcatggccgaaggcctcaagcgtgctggc
gccaacggtcccatcaccggcgaagccgtcaagaccgcactggaaacgttgcgtgacttc
gatcccatgggattggctccgcttatctcctacttcccggatgatcaccgcccgaatatg
gctgtcttcctgtacaccatcaaggacggcaagctgaccttcgtgaaagagcagattctg
gaacgccgcgccgactggctcggtcactaa
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