Pseudodesulfovibrio sediminis: PSDVSF_29210
Help
Entry
PSDVSF_29210 CDS
T08380
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00240
Pyrimidine metabolism
psef01100
Metabolic pathways
psef01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PSDVSF_29210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psef02044
]
PSDVSF_29210
Enzymes [BR:
psef01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PSDVSF_29210
Secretion system [BR:
psef02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PSDVSF_29210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
OTT_1508_deam
Motif
Other DBs
NCBI-ProteinID:
BCS89679
LinkDB
All DBs
Position
complement(3097635..3098093)
Genome browser
AA seq
152 aa
AA seq
DB search
MQSRLPWPEYFMRIAHLVAQRSTCTRRAVGAIAVGGKRILATGYNGVPSNVAHCEEVGCI
RDKLGIPSGERHELCRGLHAEQNVIIQAATHSLDLKGCDIYCTTKPCILCTKMLINCEVR
NIYFAENYPDELSEQMLAEARVNYVFMEGDFI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagactgccctggcccgaatatttcatgcgcatcgcccacctggtggcccag
cgctccacatgtacccgacgcgccgtcggcgccatcgccgttggcggcaaacgtatcctg
gcaacaggctataacggcgtgccctcaaatgttgcccactgcgaagaggtgggctgcatc
cgcgacaaactcggtattccttccggagaacgccacgagctgtgccgtggactgcacgcc
gagcagaatgtcatcatccaggccgccacccacagcctcgacctcaagggatgcgacatc
tactgcacaacgaaaccgtgtatcctgtgcaccaagatgctcatcaactgcgaagtgcgg
aatatctatttcgccgaaaactacccggacgaactctccgaacagatgctcgctgaggca
agagttaactatgtcttcatggaaggcgacttcatctag
DBGET
integrated database retrieval system
