Pseudodesulfovibrio sediminis: PSDVSF_29700
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Entry
PSDVSF_29700 CDS
T08380
Name
(GenBank) sugar ABC transporter permease
KO
K10544
D-xylose transport system permease protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_29700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_29700
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
PSDVSF_29700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BCS89728
LinkDB
All DBs
Position
complement(3147989..3149212)
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AA seq
407 aa
AA seq
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MDSQTQETKVSLFERLSADLEIDTRMLAMIGALLVIWLTLNYMTGGIFFTARNLYNLAVQ
TSVVGIMATGMVLVIVARHIDLSVGSVMGFTGMVIAFLQVHVFTLGAAWNWPTTVVCGLL
LGGLIGLWQGWWIAFRGVPAFVVTLGGLLVFRGAAYLVTDGRTIAPMDKTYQLLGGGIHG
SIGATGSWIFGAICVAILLFRVCRNRTKRIKFGCKPKPIWADLLTLAVGIGLICGFVLIM
NSYYKPRTEIPRGIPIPVLILIGVVAIMTLLAKVTKFGRYVFAIGGNPEAAELSGINVQR
VTMYIFGVMGVLCGVAAVITTARLNAGANSMGMMAELNVIAAAVIGGTSLAGGLGSIAGA
ILGALIMQSLESGMVLLGVSSAMRQVVIGMVLIVAVWFDVVYNKNRR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaaacgcaagagaccaaagtctcgctgtttgagcgactgagcgcagacctg
gagatcgacacccgcatgctcgccatgatcggagcgttgctcgtcatctggctcacgctc
aactacatgaccggcggcatctttttcacggcgcgcaacctgtacaacctggccgtacag
accagcgtggtcggcatcatggcgacaggcatggtgctcgtcatcgtggcccgtcatatc
gacctttccgttggctccgtcatgggctttaccggcatggtcatcgccttcctgcaagta
catgtctttacgctgggcgcggcctggaactggccgacgaccgttgtctgcggcctgctg
ctcggcggcctgatcggattgtggcagggctggtggatcgcctttcgcggcgtcccggca
ttcgttgtcacgctcggtggcctgctcgtcttccgcggtgcggcctacctcgttacggac
ggacggaccatcgcgcccatggacaagacgtaccagctcctcggcggcggcatccacggc
tccatcggtgccacaggaagctggatattcggcgccatctgcgtggcgatcctgctcttt
cgcgtatgccggaatcggacgaaacggatcaaattcgggtgtaaacccaagcccatatgg
gcggatctactgaccctggccgtgggcataggcctgatctgcggctttgtcctgatcatg
aattcctattacaagccgcgcaccgaaattcctcgcggcatccccattccggtacttatt
ctcatcggcgtcgtggcgatcatgaccctgctcgccaaggtcaccaaattcggtcgctat
gtgtttgccatcggcggcaatccggaggcggcggagttgtccggcatcaatgtgcaacgg
gtgaccatgtatatctttggcgtcatgggcgtgctgtgcggcgtggccgcggtcatcacc
acggcgcgactcaatgcaggggccaactccatgggcatgatggcggaactcaacgtcatc
gcggcggctgtcatcggcggcacatcgctggccggtgggctggggtccattgccggggcc
atcctcggcgcgttgatcatgcagtccctggaatcaggcatggtcctgctcggcgtttca
tccgccatgcggcaggttgtcatcggcatggtcctcatcgtggccgtgtggtttgatgta
gtctacaacaagaacagacgatag
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