Pseudodesulfovibrio sediminis: PSDVSF_29790
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Entry
PSDVSF_29790 CDS
T08380
Name
(GenBank) lipoprotein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
psef02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_29790
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDVSF_29790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_29790
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PSDVSF_29790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
BCS89737
LinkDB
All DBs
Position
complement(3159223..3160473)
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AA seq
416 aa
AA seq
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MLRNRWSQDVRNLIWIPCLLCLILALSGCNASDDSSSADSHVPGVSDTTIRLGSSLALTG
HAGYLGTQTLRGAYAYINHINETGGVHGRTIEIEAKDDSYDPPKCLANTQRFIIDNSVFA
LFCYVGTPTTVKALPLVEEARIPLIGMFTGANGLRDPFNRYVVNIRASYYQETEAAVTHL
VKDLDINRIAVFYQYDAYGFDGLIGTELALKKFNMEPVARGSYIRGTQDVEEGLDRILTT
RAEAVVMIGTYRACARFVNLAREHQYNPIFYTVSFVGAEELARRIETTSPANVLMSQVVP
PPSTISMNSGAASDYVNLLNQYFPDDTPSFVGLEGFLNARVLVEGLRKAGRDLTREKFID
AIESIKNLPLGPGMSITYGPEDRQGMETIYFTRLEGDHFVPFADWPGLKQKMEALQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaaccgctggagccaagacgtgagaaacctgatctggataccctgcctgttg
tgcctgatcctggcattatcaggctgcaacgcctcggacgactcctcgtccgcagattct
catgttcccggcgtatccgacaccaccatcaggctcggctcttccctggcgctgaccggc
catgccgggtatctcggcacccagacccttcgcggtgcctacgcctatatcaatcatatc
aatgaaacaggcggcgtccatggccggaccatagaaattgaggccaaagacgactcatac
gacccgcccaaatgcctggcaaacacccagcgattcatcatcgacaactcggtgttcgcg
ttattctgctatgtgggcacccccaccacggtgaaagcgctccccctggtggaagaggcc
cggattccccttatcggcatgttcaccggcgccaacggcctgcgggaccccttcaaccgc
tatgtcgtcaatatacgggcctcctactatcaggagaccgaagccgccgtgacgcatctg
gtcaaggacctggacatcaacagaatcgccgtcttctaccaatatgatgcctatggattc
gacggtctgatcggcacggagctggccctcaagaaattcaatatggagccggtggctcgc
ggatcctatattcggggaacccaggatgtggaggaaggactggatcgcattctgacgaca
agagccgaggccgtggtcatgatcggcacctacagggcatgcgcccgcttcgtgaacctg
gcccgcgaacatcaatacaaccccatcttctacacggtctcctttgtgggcgcggaagag
cttgcccgacgcatcgagaccacttcaccggcaaatgtgctcatgtcgcaggtggtccct
cccccgtccactatctccatgaattccggggctgcctccgattatgtcaatctgctcaac
cagtatttcccggacgacacccccagcttcgtcgggcttgaggggtttctcaacgcccgg
gttctggtggaagggctgcgcaaagccggtcgtgacctgacccgtgaaaaatttatcgac
gccattgaatccatcaagaaccttccccttggtccaggcatgtccatcacctatggcccg
gaagatcgccagggcatggagaccatctattttacccgccttgaaggtgatcatttcgtg
ccttttgcggactggcccggattgaagcagaagatggaggcgcttcaatga
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