Pseudodesulfovibrio sediminis: PSDVSF_30440
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Entry
PSDVSF_30440 CDS
T08380
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02010
ABC transporters
psef02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDVSF_30440
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PSDVSF_30440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_30440
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PSDVSF_30440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
ANF_receptor
PucR
Motif
Other DBs
NCBI-ProteinID:
BCS89802
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All DBs
Position
3234848..3235723
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AA seq
291 aa
AA seq
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MKKLLTLAIALVLTMALGVSAQAKDTIALVVSTLNNPFFVTLKDGAVKQAGDMGYEIIVL
DSQNDPAKELANVEDLIVRGVKAVLINPTDSDAVSNAIRLINKADIPVLTLDRGASRGTV
ASHIASDNVAGGEMAGNYMAEKLGKGAMVIQLEGLAGTSAARDRGAGFAKAVEANGFKVL
ASQPADFDRTKGLNVMENMLASHGDVQGVFAQNDEMALGAIRALKAAGKSVVVVGFDGTD
DGVAAVKRGDMAGTIAQQPALIGSLGVQTADKVLKGEKVEAYIPVPLMVVK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttttgacccttgccattgccctggttctgaccatggcgctcggcgtgtct
gcacaggccaaggataccatcgcactggtggtctccaccctgaacaacccgttcttcgtc
accctgaaagacggtgccgtgaaacaggccggtgacatgggctacgagatcattgttctg
gattcccagaacgacccggccaaggagctggccaacgtggaagacctgatcgttcgcggc
gtcaaggccgtgctcatcaaccccactgattccgatgcggtttccaacgccatccgcctg
atcaacaaggctgatatcccggtcctgaccctcgatcgcggcgcttctcgcggcacggtc
gccagccacatcgcttccgacaacgtcgccggtggtgagatggccggtaattacatggca
gaaaagctcggcaagggtgccatggtcattcagcttgaggggttggctggtacttctgcc
gcacgcgatcgcggcgcaggctttgccaaggctgtcgaagccaacgggttcaaggtgctg
gcttcccagcctgccgattttgatcgtaccaaggggctgaatgtcatggagaatatgctt
gccagccacggcgacgtgcagggtgttttcgcacagaatgacgagatggccctcggcgcc
atccgcgcactcaaggccgcaggcaagtctgttgttgtcgttggtttcgatggcacggac
gacggtgttgccgcggtcaagcgtggcgacatggctggtaccattgctcagcagcccgcg
ctgatcggttctctgggtgttcagaccgcagacaaggtcctcaagggcgagaaggtcgaa
gcgtacattcctgtcccgttgatggtcgtcaagtaa
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