Pseudodesulfovibrio sediminis: PSDVSF_30700
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Entry
PSDVSF_30700 CDS
T08380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDVSF_30700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_30700
Transporters [BR:
psef02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSDVSF_30700
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
Mg_chelatase
AAA_29
SMC_N
nSTAND1
AAA_22
AAA_16
AAA_25
RsgA_GTPase
NACHT
MMR_HSR1
ATPase
DUF87
MTBMA_p00010_2nd
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BCS89828
UniProt:
A0ABM7P9T6
LinkDB
All DBs
Position
complement(3263291..3264217)
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AA seq
308 aa
AA seq
DB search
MLTVNNLSIEFNRYAKGWQKKTVHPVRDLSLNIPGGSIVAVVGSSGSGKSLLAHAILGLL
PHNAKATGDILFKDTQLDPRRIRQLRGREIALIPQSVTSLNPLARVGNQVFRAARLSGKC
CTTAARSTDSAFSRYKLHDTVKSFFPFQVSGGMARRVLTATATAGDASLFIADEPTSGLD
PLVAKKSLAHLRELADAGKSVMLITHDLDAAVDIADYVAVIYAGTTVEFAPAASFREGSG
PMHPYSQALWNALPQQSFSFLKGNQPKDDEPIEGCVFHSRCPLGDATCRASKQPLRTINA
NQVRCCHA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtcaacaacctgtccatagagttcaaccggtatgccaagggatggcagaag
aaaacggtccacccggtccgcgacctgtccctgaacatccccggcggcagcatcgtcgcc
gttgtcggctccagcggttccggcaagagcctcctggcacacgccatcctcgggctgctc
ccgcacaatgcgaaagcaaccggtgacatcctgttcaaggacacacagcttgatccccgg
cgcatccgtcaactgcggggccgtgagatagccctcatcccgcaatcagtgacctcgctc
aacccgctggcccgggtcggtaatcaggtgttccgtgcagccagattaagcgggaaatgc
tgcaccaccgccgcccgcagcacggactcggccttttcccggtacaaactccacgacacc
gtcaaatcgttcttcccctttcaggtctccgggggcatggcccggcgggtgctgaccgcc
acggccacagccggtgacgccagcctgttcatcgccgatgaacccacgtccgggcttgac
ccgctggtggcaaagaaatccctggcccatctcagggagctggcggacgccgggaagtcc
gtcatgctcatcacccatgacctcgatgccgcggtggacatcgcggactacgtggccgtc
atctatgctggcaccacggtcgaattcgctccggctgccagcttcagggaaggctccggc
ccaatgcacccgtattcccaggcattgtggaatgcgctcccgcagcagtcattcagcttc
ctgaaagggaatcagcccaaggacgatgaacccattgagggatgcgttttccattcccgc
tgtccgctcggagatgcaacctgccgggcctcgaaacagccactcaggaccatcaacgcc
aaccaggtgaggtgctgccatgcttaa
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